RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 HTR3BO95264 441 aa14.92□□□□□ -0.02
CUX1-213ENST00000549414 SPI1P17947 270 aa14.92□□□□□ -0.02
CUX1-213ENST00000549414 C17orf67Q0P5P2 114 aa14.92□□□□□ -0.02
CUX1-213ENST00000549414 KCTD20Q7Z5Y7 419 aa14.92□□□□□ -0.02
CUX1-213ENST00000549414 SIAH3Q8IW03 269 aa14.92□□□□□ -0.02
CUX1-213ENST00000549414 KCTD12Q96CX2 325 aaKnown RBP14.92□□□□□ -0.02
CUX1-213ENST00000549414 OR51B6Q9H340 312 aa14.92□□□□□ -0.02
CUX1-213ENST00000549414 FFAR1O14842 300 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 AKR7A3O95154 331 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 KNG1P01042 644 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 IGHG1P01857 330 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 CXADRP78310 365 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 FAM69AQ5T7M9 428 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 PLCZ1Q86YW0 608 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 ST6GALNAC5Q9BVH7 336 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 LIN7BQ9HAP6 207 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 UBQLN2Q9UHD9 624 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 RHBDD3Q9Y3P4 386 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 A6NLC8 198 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 NPR2P20594 1047 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 SIRT6Q8N6T7 355 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 OR7G1Q8NGA0 311 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 EVA1AQ9H8M9 152 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 SLC25A19Q9HC21 320 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 TCN2P20062 427 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 CAPZA1P52907 286 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 GIMAP1Q8WWP7 306 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 SNAPC3Q92966 411 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 TREM1Q9NP99 234 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 MUTYHQ9UIF7 546 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 MOKQ9UQ07 419 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 UGT2A1Q9Y4X1 527 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 NPFFR2Q9Y5X5 522 aa14.91□□□□□ -0.02
CUX1-213ENST00000549414 SHISA7A6NL88 538 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 A8MVM7 634 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 VSTM5A8MXK1 200 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 ALOX12BO75342 701 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 RAB3AP20336 220 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 TEKQ02763 1124 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 ALKBH1Q13686 389 aaKnown RBP14.9□□□□□ -0.02
CUX1-213ENST00000549414 FZD2Q14332 565 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 COL28A1Q2UY09 1125 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 METTL11BQ5VVY1 283 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 FAM57BQ71RH2 274 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 OR51T1Q8NGJ9 327 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 NT5CQ8TCD5 201 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 TOMM40LQ969M1 308 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 FYTTD1Q96QD9 318 aaKnown RBP14.9□□□□□ -0.02
CUX1-213ENST00000549414 FBXO9Q9UK97 447 aaPredicted RBP14.9□□□□□ -0.02
CUX1-213ENST00000549414 COA3Q9Y2R0 106 aaPredicted RBP14.9□□□□□ -0.02
CUX1-213ENST00000549414 TDRD6O60522 2096 aaKnown RBP14.9□□□□□ -0.02
CUX1-213ENST00000549414 SCN2AQ99250 2005 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 A0A1W2PPV9 198 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 P2RY10O00398 339 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 GDF1P27539 372 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 CD34P28906 385 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 CLDN17P56750 224 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 CSNK2A1P68400 391 aaPredicted RBP14.9□□□□□ -0.02
CUX1-213ENST00000549414 RPL18Q07020 188 aaKnown RBP14.9□□□□□ -0.02
CUX1-213ENST00000549414 ZMYND11Q15326 602 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 RSU1Q15404 277 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 C12orf73Q69YU5 71 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 CSNK2A3Q8NEV1 391 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 CPNE2Q96FN4 548 aaPredicted RBP14.9□□□□□ -0.02
CUX1-213ENST00000549414 COQ3Q9NZJ6 369 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 CT62P0C5K7 136 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 SRMP19623 302 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 PTPN6P29350 595 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 GZMMP51124 257 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 PUDPQ08623 228 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 OPN5Q6U736 354 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 METAP1DQ6UB28 335 aaPredicted RBP14.9□□□□□ -0.02
CUX1-213ENST00000549414 CMIPQ8IY22 773 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 ULBP2Q9BZM5 246 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 POLEQ07864 2286 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 FAM230AA0A1W2PPH8 454 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 PCMT1P22061 227 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 PPICP45877 212 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 MLC1Q15049 377 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 BAK1Q16611 211 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 YOD1Q5VVQ6 348 aaPredicted RBP14.9□□□□□ -0.02
CUX1-213ENST00000549414 OR2L13Q8N349 312 aa14.9□□□□□ -0.02
CUX1-213ENST00000549414 NUDT21O43809 227 aaKnown RBP14.89□□□□□ -0.03
CUX1-213ENST00000549414 RAD51DO75771 328 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 TSPAN9O75954 239 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 IFNGR1P15260 489 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 KIR2DL1P43626 348 aaPredicted RBP14.89□□□□□ -0.03
CUX1-213ENST00000549414 HNRNPFP52597 415 aaKnown RBP14.89□□□□□ -0.03
CUX1-213ENST00000549414 DCAF12Q5T6F0 453 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 BOLLQ8N9W6 283 aaKnown RBP14.89□□□□□ -0.03
CUX1-213ENST00000549414 OR5D14Q8NGL3 314 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 FANCFQ9NPI8 374 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 PADI1Q9ULC6 663 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 SPINT1O43278 529 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 ADAM23O75077 832 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 HMGA2P52926 109 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 SELENOVP59797 346 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 VAMP2P63027 116 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 TPBGQ13641 420 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 FCN2Q15485 313 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms