RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 RRP15Q9Y3B9 282 aaKnown RBP18.66■□□□□ 0.58
CACNB3-210ENST00000548874 ADAM18Q9Y3Q7 739 aa18.66■□□□□ 0.58
CACNB3-210ENST00000548874 A8MXE2 369 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 SMNDC1O75940 238 aaKnown RBP eCLIP18.65■□□□□ 0.58
CACNB3-210ENST00000548874 SOX14O95416 240 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 IGFBP1P08833 259 aaPredicted RBP18.65■□□□□ 0.58
CACNB3-210ENST00000548874 OSMP13725 252 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 RPL27P61353 136 aaKnown RBP18.65■□□□□ 0.58
CACNB3-210ENST00000548874 ERVK-25P63136 954 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.65■□□□□ 0.58
CACNB3-210ENST00000548874 ZNF100Q8IYN0 542 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 ZNF610Q8N9Z0 462 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 ZNF519Q8TB69 540 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 CA5BP1Q8WTZ4 195 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 RBM4BQ9BQ04 359 aaKnown RBP18.65■□□□□ 0.58
CACNB3-210ENST00000548874 C9orf16Q9BUW7 83 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 RBM4Q9BWF3 364 aaKnown RBP18.65■□□□□ 0.58
CACNB3-210ENST00000548874 RNPEPL1Q9HAU8 725 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 NKX1-2Q9UD57 310 aaPredicted RBP18.65■□□□□ 0.58
CACNB3-210ENST00000548874 PRSS50Q9UI38 385 aa18.65■□□□□ 0.58
CACNB3-210ENST00000548874 EI24O14681 340 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 ARPC3O15145 178 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 CNOT4O95628 575 aaKnown RBP18.64■□□□□ 0.57
CACNB3-210ENST00000548874 TXNDC12O95881 172 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 ALPLP05186 524 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 TOP3AQ13472 1001 aaPredicted RBP18.64■□□□□ 0.57
CACNB3-210ENST00000548874 RIPK1Q13546 671 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 DAG1Q14118 895 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 FBXL19-AS1Q494R0 122 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 SLC36A3Q495N2 470 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 TSPO2Q5TGU0 170 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 FAM205BPQ63HN1 556 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 GPR139Q6DWJ6 353 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 ZNF474Q6S9Z5 364 aaPredicted RBP18.64■□□□□ 0.57
CACNB3-210ENST00000548874 HDDC2Q7Z4H3 204 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 CBR4Q8N4T8 237 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 OR52L1Q8NGH7 329 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 SLC25A44Q96H78 314 aaPredicted RBP18.64■□□□□ 0.57
CACNB3-210ENST00000548874 LINC00470Q9BZP3 86 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 SLCO5A1Q9H2Y9 848 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 KRT84Q9NSB2 600 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 MALT1Q9UDY8 824 aa18.64■□□□□ 0.57
CACNB3-210ENST00000548874 FOXD3Q9UJU5 478 aaPredicted RBP18.64■□□□□ 0.57
CACNB3-210ENST00000548874 OR6C65A6NJZ3 312 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 ZNF726A6NNF4 738 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 FAM90A27PA6NNH2 459 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 CENPBD1B2RD01 187 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 EEF1E1-BLOC1S5C9J1V9 151 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 BHLHE40O14503 412 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 SOCS2O14508 198 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 IMPA2O14732 288 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 CASQ2O14958 399 aaPredicted RBP18.63■□□□□ 0.57
CACNB3-210ENST00000548874 EEF1E1O43324 174 aaKnown RBP18.63■□□□□ 0.57
CACNB3-210ENST00000548874 MITFO75030 526 aaPredicted RBP18.63■□□□□ 0.57
CACNB3-210ENST00000548874 SLC43A1O75387 559 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 CLDN14O95500 239 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 PPP1R3DO95685 299 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 IGFBP5P24593 272 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 SDHAP31040 664 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 ASCL1P50553 236 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 ALDH3A2P51648 485 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 RUNX1T1Q06455 604 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 FBXW9Q5XUX1 488 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 C20orf196Q8IYI0 205 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 ARIH2OSQ8N7S6 290 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 POMGNT2Q8NAT1 580 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 SSC4DQ8WTU2 575 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 EME1Q96AY2 570 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 LRR1Q96L50 414 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 Q96M85 177 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 SLC29A1Q99808 456 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 IFT27Q9BW83 186 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 TSSK6Q9BXA6 273 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 MRPL13Q9BYD1 178 aaKnown RBP18.63■□□□□ 0.57
CACNB3-210ENST00000548874 SLC7A10Q9NS82 523 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 TBC1D23Q9NUY8 699 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 GRHPRQ9UBQ7 328 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 IER3IP1Q9Y5U9 82 aa18.63■□□□□ 0.57
CACNB3-210ENST00000548874 FREM1Q5H8C1 2179 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 ALPK2Q86TB3 2170 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 FLNCQ14315 2725 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 UPK3AO75631 287 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 PGA4P0DJD7 388 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 PGA3P0DJD8 388 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 ACADSP16219 412 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 RPS6KA3P51812 740 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 CAMK2DQ13557 499 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 TRIP10Q15642 601 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 CLEC12AQ5QGZ9 265 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 ZBTB49Q6ZSB9 765 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 Q6ZT83 130 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 BEND4Q6ZU67 534 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 LUZP2Q86TE4 346 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 GABRG1Q8N1C3 465 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 LNX2Q8N448 690 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 OR4Q3Q8NH05 313 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 TEX47Q8TBZ9 253 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 MAGEE2Q8TD90 523 aaPredicted RBP18.62■□□□□ 0.57
CACNB3-210ENST00000548874 TMEM54Q969K7 222 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 ZNF570Q96NI8 536 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms