RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RENP00797 406 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 SLC2A5P22732 501 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 LTBRP36941 435 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 FNTBP49356 437 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 SELENOPP49908 381 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 ADAM8P78325 824 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 PITPNAQ00169 270 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 LTBQ06643 244 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 POU4F2Q12837 409 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 KRT77Q7Z794 578 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 TPRA1Q86W33 373 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 C20orf85Q9H1P6 137 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 S1PR5Q9H228 398 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 SLA2Q9H6Q3 261 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 FSCN3Q9NQT6 498 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 FBXL21Q9UKT6 434 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 FRYQ5TBA9 3013 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 FXYD6-FXYD2A0A087WZ82 144 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 CD38P28907 300 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 GNALP38405 381 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 SPOCK1Q08629 439 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 ATXN7L3Q14CW9 347 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 SCGB2B2Q4G0G5 96 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 PLA1AQ53H76 456 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 WBP2NLQ6ICG8 309 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 ZCCHC12Q6PEW1 402 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 ZNF782Q6ZMW2 699 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 GPAT4Q86UL3 456 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 HYLS1Q96M11 299 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 COMMD4Q9H0A8 199 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 FXYD6Q9H0Q3 95 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 SLCO1C1Q9NYB5 712 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 A0A1W2PPC4 97 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 ZSCAN5BA6NJL1 495 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 PPM1BO75688 479 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 BTCP35070 178 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 PTH2RP49190 550 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 NKPD1Q17RQ9 610 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 C1QTNF12Q5T7M4 302 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 CARD17Q5XLA6 110 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 ZNF595Q8IYB9 648 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 SLC2A12Q8TD20 617 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 ZNF224Q9NZL3 707 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 FRRS1LQ9P0K9 344 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 CTSFQ9UBX1 484 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 KLHL21Q9UJP4 597 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 PLCL2Q9UPR0 1127 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 IGKV1D-42A0A075B6H8 117 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 RGS13O14921 159 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 KRT33AO76009 404 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 RGS11O94810 467 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 GLCEO94923 617 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 MAP3K8P41279 467 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 CAPZBP47756 277 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 RPS11P62280 158 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 ZNF74Q16587 644 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 STAC2Q6ZMT1 411 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 TRILQ7L0X0 811 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 OR14A16Q8NHC5 309 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 TNFAIP8L1Q8WVP5 186 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 SOSTQ9BQB4 213 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 ATG5Q9H1Y0 275 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 INPP5EQ9NRR6 644 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 PRODH2Q9UF12 536 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 MRM2Q9UI43 246 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 BAIAP2Q9UQB8 552 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 POLR1DQ9Y2S0 133 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 FAM25EA8MYX2 175 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 TACSTD2P09758 323 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 GTF2F2P13984 249 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 RORAP35398 523 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 EFNB2P52799 333 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 PRPS1P60891 318 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 ZNF117Q03924 483 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 FMODQ06828 376 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 ACSM1Q08AH1 577 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 FHL1Q13642 323 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 B3GNTL1Q67FW5 361 aaPredicted RBP12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 LAMTOR1Q6IAA8 161 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 NHLRC1Q6VVB1 395 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 POMGNT2Q8NAT1 580 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 RGP1Q92546 391 aaPredicted RBP12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 TCTN2Q96GX1 697 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 SPACA5Q96QH8 159 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 NUDT9Q9BW91 350 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 SEC61A2Q9H9S3 476 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 NOX3Q9HBY0 568 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 MMP25Q9NPA2 562 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 COPS7AQ9UBW8 275 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 OR5V1Q9UGF6 321 aa12.41□□□□□ -0.42
PRPF40B-209ENST00000548825 IL11P20809 199 aa12.4□□□□□ -0.42
PRPF40B-209ENST00000548825 ART1P52961 327 aa12.4□□□□□ -0.42
PRPF40B-209ENST00000548825 ARFIP1P53367 373 aa12.4□□□□□ -0.42
PRPF40B-209ENST00000548825 C4orf46Q504U0 113 aa12.4□□□□□ -0.42
PRPF40B-209ENST00000548825 MESTQ5EB52 335 aa12.4□□□□□ -0.42
PRPF40B-209ENST00000548825 CHST4Q8NCG5 386 aa12.4□□□□□ -0.42
PRPF40B-209ENST00000548825 OR56B4Q8NH76 319 aa12.4□□□□□ -0.42
PRPF40B-209ENST00000548825 PTPMT1Q8WUK0 201 aaPredicted RBP12.4□□□□□ -0.42
PRPF40B-209ENST00000548825 MRPL48Q96GC5 212 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms