RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PTP4A3O75365 173 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 RAD51DO75771 328 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 CST1P01037 141 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 CRYGSP22914 178 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 FPR3P25089 353 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 FOXG1P55316 489 aaPredicted RBP14.79□□□□□ -0.04
CCDC38-203ENST00000546803 ROR2Q01974 943 aaKnown RBP14.79□□□□□ -0.04
CCDC38-203ENST00000546803 LGALS3BPQ08380 585 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 CAMK2DQ13557 499 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 FHL1Q13642 323 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 GABRA6Q16445 453 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 ACKR1Q16570 336 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 CARD17Q5XLA6 110 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 C1orf94Q6P1W5 598 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 C17orf78Q8N4C9 275 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 LRRC75AQ8NAA5 344 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 OR6N1Q8NGY5 312 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 GNPDA2Q8TDQ7 276 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 ZNF566Q969W8 418 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 MUCL1Q96DR8 90 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 ALKBH3Q96Q83 286 aaPredicted RBP14.79□□□□□ -0.04
CCDC38-203ENST00000546803 TXNIPQ9H3M7 391 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 NGBQ9NPG2 151 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 SIGLEC7Q9Y286 467 aa14.79□□□□□ -0.04
CCDC38-203ENST00000546803 HCFC1P51610 2035 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 FAM221AA4D161 298 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 UNC119BA6NIH7 251 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 FKBP6O75344 327 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 CCNB2O95067 398 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 NDUFB2O95178 105 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 IGHG1P01857 330 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 IGHMP01871 453 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 THBDP07204 575 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 CSNK1A1P48729 337 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 CTXN1P60606 82 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 STK11Q15831 433 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 C9orf135Q5VTT2 229 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 FAM205BPQ63HN1 556 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 C22orf34Q6ZV56 151 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 LINGO2Q7L985 606 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 YTHDF3Q7Z739 585 aaKnown RBP14.78□□□□□ -0.04
CCDC38-203ENST00000546803 ASB10Q8WXI3 467 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 TMEM54Q969K7 222 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 ZC3HAV1LQ96H79 300 aaKnown RBP14.78□□□□□ -0.04
CCDC38-203ENST00000546803 GPR35Q9HC97 309 aa14.78□□□□□ -0.04
CCDC38-203ENST00000546803 M0R3G1 203 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 GNGT2O14610 69 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 CTAG2O75638 210 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 CD14P08571 375 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 PGA4P0DJD7 388 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 PGA3P0DJD8 388 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 PRF1P14222 555 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 ACADSP16219 412 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 RPL4P36578 427 aaKnown RBP14.77□□□□□ -0.05
CCDC38-203ENST00000546803 GSSP48637 474 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 RPL27P61353 136 aaKnown RBP14.77□□□□□ -0.05
CCDC38-203ENST00000546803 TSPAN31Q12999 210 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 MELKQ14680 651 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 TAB1Q15750 504 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 MICAQ29983 383 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 ARMC4Q5T2S8 1044 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 PGBD2Q6P3X8 592 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 UTP4Q969X6 686 aaKnown RBP14.77□□□□□ -0.05
CCDC38-203ENST00000546803 GPA33Q99795 319 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 MRPL13Q9BYD1 178 aaKnown RBP14.77□□□□□ -0.05
CCDC38-203ENST00000546803 ULBP2Q9BZM5 246 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 CRLF2Q9HC73 371 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 RASSF1Q9NS23 344 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 VNN3Q9NY84 501 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 GLTPQ9NZD2 209 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 U3KQV3 271 aa14.77□□□□□ -0.05
CCDC38-203ENST00000546803 HECTD1Q9ULT8 2610 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 A6NIZ1 184 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 DEFB108AA8MXU0 73 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 NR2C1P13056 603 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 HOXB1P14653 301 aaPredicted RBP14.76□□□□□ -0.05
CCDC38-203ENST00000546803 CDH2P19022 906 aaPredicted RBP14.76□□□□□ -0.05
CCDC38-203ENST00000546803 PAX7P23759 505 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 HOXC12P31275 282 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 ERFP50548 548 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 CLRN1P58418 232 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 RAP1BP61224 184 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 RAP1AP62834 184 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 PPA1Q15181 289 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 CEACAM16Q2WEN9 425 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 BEX5Q5H9J7 111 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 PHYHD1Q5SRE7 291 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 ZNF770Q6IQ21 691 aaPredicted RBP14.76□□□□□ -0.05
CCDC38-203ENST00000546803 ANKRD16Q6P6B7 361 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 WFDC8Q8IUA0 241 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 WDFY1Q8IWB7 410 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 OR1K1Q8NGR3 316 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 MAGEE2Q8TD90 523 aaPredicted RBP14.76□□□□□ -0.05
CCDC38-203ENST00000546803 SLCO4A1Q96BD0 722 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 DUS3LQ96G46 650 aaKnown RBP14.76□□□□□ -0.05
CCDC38-203ENST00000546803 GPX7Q96SL4 187 aaPredicted RBP14.76□□□□□ -0.05
CCDC38-203ENST00000546803 POLDIP3Q9BY77 421 aaKnown RBP14.76□□□□□ -0.05
CCDC38-203ENST00000546803 OBP2BQ9NPH6 170 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 SLC17A5Q9NRA2 495 aa14.76□□□□□ -0.05
CCDC38-203ENST00000546803 DNAJB9Q9UBS3 223 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms