RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ROBO4Q8WZ75 1007 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 RND1Q92730 232 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 SLC25A36Q96CQ1 311 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 BPIFA2Q96DR5 249 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 SGTBQ96EQ0 304 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 DUS3LQ96G46 650 aaKnown RBP5.63□□□□□ -1.51
PRKDC-211ENST00000546304 GMPPAQ96IJ6 420 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-211ENST00000546304 HS6ST2Q96MM7 605 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 PSD2Q9BQI7 771 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 FUZQ9BT04 418 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 SFXN3Q9BWM7 321 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 DENND2DQ9H6A0 471 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-211ENST00000546304 CHST11Q9NPF2 352 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 KRCC1Q9NPI7 259 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-211ENST00000546304 NANSQ9NR45 359 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 EMC3Q9P0I2 261 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 KLHL13Q9P2N7 655 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 ERRFI1Q9UJM3 462 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF229Q9UJW7 825 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 CLEC4AQ9UMR7 237 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 TMEM5Q9Y2B1 443 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 B3GALT5Q9Y2C3 310 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 U3KQV3 271 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 DCHS2Q6V1P9 2916 aa5.63□□□□□ -1.51
PRKDC-211ENST00000546304 HCFC1P51610 2035 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 IGKV3D-15A0A087WSY6 115 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 A0A0G2JNJ9 132 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 HTR3EA5X5Y0 456 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF716A6NP11 495 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 HSPB2A8KAH6 182 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 TNFRSF11BO00300 401 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 OR10H3O60404 316 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 ZG16O60844 167 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 SS18L1O75177 396 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 ENTPD5O75356 428 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 TNFSF13O75888 250 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 OR7A10O76100 309 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 TOXO94900 526 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 AGFG2O95081 481 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 RCBTB2O95199 551 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 CST1P01037 141 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 LDLRP01130 860 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 CRHP06850 196 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 ASAH2BP0C7U1 165 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 SAGP10523 405 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 BMP5P22003 454 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 CHRNB4P30926 498 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 CEACAM8P31997 349 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 P2RY4P51582 365 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 AGFG1P52594 562 aaKnown RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 SLC16A1P53985 500 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 RPS4XP62701 263 aaKnown RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 SIRPAP78324 504 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 PRKCDQ05655 676 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 PUDPQ08623 228 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 RASGEF1BQ0VAM2 473 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 PMS2P3Q13401 168 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 LSAMPQ13449 338 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 GK3PQ14409 553 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 ATP6AP1Q15904 470 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 HSPB2Q16082 182 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 ZFP1Q6P2D0 407 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 TBPL2Q6SJ96 375 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 ETV3LQ6ZN32 361 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 H1FNTQ75WM6 255 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 RRM2BQ7LG56 351 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 GPAT4Q86UL3 456 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 MEX3DQ86XN8 651 aaKnown RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 CCDC71Q8IV32 467 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 RNF113BQ8IZP6 322 aaKnown RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 TMEM99Q8N816 258 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 LINC00482Q8N8I6 264 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 CNEP1R1Q8N9A8 125 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 OR10G2Q8NGC3 310 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 OR9Q2Q8NGE9 314 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 OR13C2Q8NGS9 318 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 OR5J2Q8NH18 312 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 FANK1Q8TC84 345 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 STMN2Q93045 179 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 INTS12Q96CB8 462 aaKnown RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 TACO1Q9BSH4 297 aaKnown RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 NAA11Q9BSU3 229 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 BCO1Q9HAY6 547 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 GLRX2Q9NS18 164 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 ARMC1Q9NVT9 282 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 MRPL39Q9NYK5 338 aaKnown RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 COQ3Q9NZJ6 369 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 B3GAT1Q9P2W7 334 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 DNAJB9Q9UBS3 223 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 Q9UFV3 132 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 FBXL7Q9UJT9 491 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 ING1Q9UK53 422 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 TMCC3Q9ULS5 477 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 RNF6Q9Y252 685 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 RASD1Q9Y272 281 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 AP4S1Q9Y587 144 aa5.62□□□□□ -1.51
PRKDC-211ENST00000546304 ASH1LQ9NR48 2969 aaKnown RBP5.62□□□□□ -1.51
PRKDC-211ENST00000546304 FLNBO75369 2602 aaKnown RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 UNC79Q9P2D8 2635 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 TRAV27A0A087WT01 109 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms