RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 IGFN1Q86VF2 1251 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 C20orf196Q8IYI0 205 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 ZNF433Q8N7K0 673 aaPredicted RBP18.04■□□□□ 0.48
HMGA2-211ENST00000545998 ASB10Q8WXI3 467 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 KISS1RQ969F8 398 aaPredicted RBP18.04■□□□□ 0.48
HMGA2-211ENST00000545998 LRR1Q96L50 414 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 TXNIPQ9H3M7 391 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 DENND2DQ9H6A0 471 aaPredicted RBP18.04■□□□□ 0.48
HMGA2-211ENST00000545998 DEAF1O75398 565 aaPredicted RBP18.04■□□□□ 0.48
HMGA2-211ENST00000545998 GASTP01350 101 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 IGHMP01871 453 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 ITGA5P08648 1049 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 KIR2DL3P43628 341 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 DAP3P51398 398 aaKnown RBP18.04■□□□□ 0.48
HMGA2-211ENST00000545998 CTXN1P60606 82 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 ARMC4Q5T2S8 1044 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 CARD17Q5XLA6 110 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 LINC01560Q8TB33 94 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 SLC25A44Q96H78 314 aaPredicted RBP18.04■□□□□ 0.48
HMGA2-211ENST00000545998 ALKBH3Q96Q83 286 aaPredicted RBP18.04■□□□□ 0.48
HMGA2-211ENST00000545998 OR10A4Q9H209 315 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 NTN4Q9HB63 628 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 SLC24A3Q9HC58 644 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 TAS2R16Q9NYV7 291 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 CRIM1Q9NZV1 1036 aa18.04■□□□□ 0.48
HMGA2-211ENST00000545998 HRNRQ86YZ3 2850 aaPredicted RBP18.03■□□□□ 0.48
HMGA2-211ENST00000545998 MCIDASD6RGH6 385 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 ZNF587BE7ETH6 402 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 HNRNPRO43390 633 aaKnown RBP18.03■□□□□ 0.48
HMGA2-211ENST00000545998 KRT33AO76009 404 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 NDUFB2O95178 105 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 MPGP29372 298 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 TAF11Q15544 211 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 ATP6AP1Q15904 470 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 PHYHD1Q5SRE7 291 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 ANKRD34AQ69YU3 496 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 THSD4Q6ZMP0 1018 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 BHLHA15Q7RTS1 189 aaPredicted RBP18.03■□□□□ 0.48
HMGA2-211ENST00000545998 ABHD12BQ7Z5M8 362 aaPredicted RBP18.03■□□□□ 0.48
HMGA2-211ENST00000545998 AQP11Q8NBQ7 271 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 STEAP2Q8NFT2 490 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 OR10G2Q8NGC3 310 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 DGCR6LQ9BY27 220 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 ACTR6Q9GZN1 396 aa18.03■□□□□ 0.48
HMGA2-211ENST00000545998 FBN2P35556 2912 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 SH3D21A4FU49 640 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 ARRDC5A6NEK1 342 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 RPL36A-HNRNPH2H7BZ11 118 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 E2F6O75461 281 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 PGA4P0DJD7 388 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 PGA3P0DJD8 388 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 IL32P24001 234 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 RUNX1T1Q06455 604 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 SMARCD3Q6STE5 483 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 C22orf34Q6ZV56 151 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 GPR137CQ8N3F9 429 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 FANK1Q8TC84 345 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 GIPC3Q8TF64 312 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 PYDC1Q8WXC3 89 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 ZNF566Q969W8 418 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 S100PBPQ96BU1 408 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 DACH2Q96NX9 599 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 WFIKKN1Q96NZ8 548 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 GPX7Q96SL4 187 aaPredicted RBP18.02■□□□□ 0.48
HMGA2-211ENST00000545998 NDEL1Q9GZM8 345 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 NDRG3Q9UGV2 375 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 ZNF346Q9UL40 294 aaKnown RBP18.02■□□□□ 0.48
HMGA2-211ENST00000545998 MGAT4BQ9UQ53 548 aa18.02■□□□□ 0.48
HMGA2-211ENST00000545998 ITPR2Q14571 2701 aa18.02■□□□□ 0.47
HMGA2-211ENST00000545998 CD14P08571 375 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 PPP3CBP16298 524 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 FASP25445 335 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 RPL4P36578 427 aaKnown RBP18.01■□□□□ 0.47
HMGA2-211ENST00000545998 RPL27P61353 136 aaKnown RBP18.01■□□□□ 0.47
HMGA2-211ENST00000545998 ROR2Q01974 943 aaKnown RBP18.01■□□□□ 0.47
HMGA2-211ENST00000545998 TOP3AQ13472 1001 aaPredicted RBP18.01■□□□□ 0.47
HMGA2-211ENST00000545998 C9orf135Q5VTT2 229 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 ZNF787Q6DD87 383 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 HDDC2Q7Z4H3 204 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 FAM222BQ8WU58 562 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 TMEM54Q969K7 222 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 TSPAN32Q96QS1 320 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 KATNB1Q9BVA0 655 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 POLDIP3Q9BY77 421 aaKnown RBP18.01■□□□□ 0.47
HMGA2-211ENST00000545998 MRPL13Q9BYD1 178 aaKnown RBP18.01■□□□□ 0.47
HMGA2-211ENST00000545998 GPR35Q9HC97 309 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 PDP1Q9P0J1 537 aaPredicted RBP18.01■□□□□ 0.47
HMGA2-211ENST00000545998 KCNN3Q9UGI6 736 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 IL20RAQ9UHF4 553 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 ABCA4P78363 2273 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 ABCA12Q86UK0 2595 aa18.01■□□□□ 0.47
HMGA2-211ENST00000545998 CENPBD1B2RD01 187 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 M0R3G1 203 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 IGHG1P01857 330 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 FCGR1AP12314 374 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 ACADSP16219 412 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 CSNK1A1P48729 337 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 ERVK-25P63136 954 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 HIST3H3Q16695 136 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 RFX4Q33E94 735 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms