RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ARR3P36575 388 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 OR1E2P47887 323 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 CSNK1A1P48729 337 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 GSK3BP49841 420 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 PSME3P61289 254 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 ARF1P84077 181 aaKnown RBP10.32□□□□□ -0.76
HDAC4-216ENST00000544989 PIN1Q13526 163 aaPredicted RBP10.32□□□□□ -0.76
HDAC4-216ENST00000544989 TAF11Q15544 211 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 CEACAM16Q2WEN9 425 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 PGGHGQ32M88 737 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 ANKDD1AQ495B1 522 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 SPATS1Q496A3 300 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 IFI44LQ53G44 452 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 FKBP9P1Q75LS8 142 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 SLC35D2Q76EJ3 337 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 ZNF627Q7L945 461 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 BIVMQ86UB2 503 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 OR4F15Q8NGB8 312 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 ZNF566Q969W8 418 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 FAM162AQ96A26 154 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 SGTBQ96EQ0 304 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 SLC25A44Q96H78 314 aaPredicted RBP10.32□□□□□ -0.76
HDAC4-216ENST00000544989 C18orf12Q96KH6 178 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 PRSS27Q9BQR3 290 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 TRAF4Q9BUZ4 470 aaPredicted RBP10.32□□□□□ -0.76
HDAC4-216ENST00000544989 FNDC11Q9BVV2 318 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 ULBP2Q9BZM5 246 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 DLL4Q9NR61 685 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 CBLN4Q9NTU7 201 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 USP22Q9UPT9 525 aa10.32□□□□□ -0.76
HDAC4-216ENST00000544989 NPIPB13A6NJU9 1138 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 NPIPB4C9JG80 1138 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 LRRN3E7EW58 273 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 C11orf98E9PRG8 122 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 BLOC1S5-TXNDC5H3BN57 136 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 M0R3G1 203 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 OR7A10O76100 309 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 ZNF682O95780 498 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 BCL10O95999 233 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 IGKV3-15P01624 115 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 IGHG1P01857 330 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 HLA-DOBP13765 273 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 IFNGR1P15260 489 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 CBR1P16152 277 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 FUT1P19526 365 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 APOBEC3AP31941 199 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-216ENST00000544989 FABP6P51161 128 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 DAP3P51398 398 aaKnown RBP10.31□□□□□ -0.76
HDAC4-216ENST00000544989 BIDP55957 195 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 SLC25A3Q00325 362 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 CHRNB3Q05901 458 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 LGALS3BPQ08380 585 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 TRAM2Q15035 370 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 CARD17Q5XLA6 110 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 NHLRC1Q6VVB1 395 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 LINGO2Q7L985 606 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 DPPA2Q7Z7J5 298 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 TSPYL5Q86VY4 417 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-216ENST00000544989 KRTAP1-3Q8IUG1 177 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 CDK20Q8IZL9 346 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 RNF113BQ8IZP6 322 aaKnown RBP10.31□□□□□ -0.76
HDAC4-216ENST00000544989 OFCC1Q8IZS5 231 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 MUC15Q8N387 334 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 ANKS4BQ8N8V4 417 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 TMEM255BQ8WV15 326 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 NEUROG1Q92886 237 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 Q96MF0 132 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 C1QTNF6Q9BXI9 259 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 NDEL1Q9GZM8 345 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 ANKRD19PQ9H560 264 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 MEPEQ9NQ76 525 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-216ENST00000544989 MED29Q9NX70 200 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 TAS2R5Q9NYW4 299 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 GLTPQ9NZD2 209 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 SAMD4AQ9UPU9 718 aaKnown RBP10.31□□□□□ -0.76
HDAC4-216ENST00000544989 ATP23Q9Y6H3 246 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 HEATR1Q9H583 2144 aaKnown RBP10.31□□□□□ -0.76
HDAC4-216ENST00000544989 ALPK2Q86TB3 2170 aa10.31□□□□□ -0.76
HDAC4-216ENST00000544989 A0A096LPE4 126 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 A0A1W2PPZ6 126 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 MCIDASD6RGH6 385 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 E7EQL1 145 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 SERPINI2O75830 405 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 PDE5AO76074 875 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 FARS2O95363 451 aaKnown RBP10.3□□□□□ -0.76
HDAC4-216ENST00000544989 SERPINA1P01009 418 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 IGLV1-44P01699 117 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 INHBBP09529 407 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 TNFRSF1BP20333 461 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 PTNP21246 168 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 CAPZA2P47755 286 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 UGT2B15P54855 530 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 CAMK2DQ13557 499 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 NRN1LQ496H8 165 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 SAMD4BQ5PRF9 694 aaKnown RBP10.3□□□□□ -0.76
HDAC4-216ENST00000544989 FAM205BPQ63HN1 556 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 C16orf89Q6UX73 402 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 ZNF813Q6ZN06 617 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 RRM2BQ7LG56 351 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 SLC46A3Q7Z3Q1 461 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms