RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 SNX18Q96RF0 628 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 PRDM14Q9GZV8 571 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 SLC6A15Q9H2J7 730 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 FN3KQ9H479 309 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 TOR3AQ9H497 397 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 PLEKHF2Q9H8W4 249 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 SMURF2Q9HAU4 748 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 GALNT9Q9HCQ5 603 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 MEPEQ9NQ76 525 aaPredicted RBP5.88□□□□□ -1.47
CDCA3-209ENST00000544610 MRPL39Q9NYK5 338 aaKnown RBP5.88□□□□□ -1.47
CDCA3-209ENST00000544610 SIGLEC7Q9Y286 467 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 B3GALT5Q9Y2C3 310 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 HIF3AQ9Y2N7 669 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 SLC6A5Q9Y345 797 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 CDH10Q9Y6N8 788 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 MPDZO75970 2070 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 IGKV1D-42A0A075B6H8 117 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 TMED7-TICAM2A0A0A6YYA0 188 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 TRIM64A6NGJ6 449 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 UNC119BA6NIH7 251 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SNTNA6NMZ2 147 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 EFCAB9A8MZ26 197 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 AHRRA9YTQ3 701 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 CENPBD1B2RD01 187 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 OIP5O43482 229 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 ZIC3O60481 467 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 OR7A10O76100 309 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 NDUFB2O95178 105 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 GOSR1O95249 250 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 AHSA1O95433 338 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SNAP29O95721 258 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 PMS2P2O95744 297 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 TXNDC12O95881 172 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 ACTL6AO96019 429 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 EPXP11678 715 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 PEPDP12955 493 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 PRKACGP22612 351 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 GDF1P27539 372 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SLC6A6P31641 620 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 CENPAP49450 140 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 CCR4P51679 360 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SNRPGP62308 76 aaKnown RBP5.87□□□□□ -1.47
CDCA3-209ENST00000544610 CSNK2A1P68400 391 aaPredicted RBP5.87□□□□□ -1.47
CDCA3-209ENST00000544610 EFNB1P98172 346 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 HOXC5Q00444 222 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SORDQ00796 357 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 EGR4Q05215 589 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 LTBQ06643 244 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 TOP3AQ13472 1001 aaPredicted RBP5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SGCBQ16585 318 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 ZNF74Q16587 644 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 KCTD21Q4G0X4 260 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SYT14P1Q58G82 188 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 TMEM201Q5SNT2 666 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 ZNF691Q5VV52 312 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 C1orf140Q5VVS0 124 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 NSUN5P2Q63ZY6 315 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 C12orf73Q69YU5 71 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 GPR139Q6DWJ6 353 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SLC27A4Q6P1M0 643 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 LRFN4Q6PJG9 635 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SMARCD3Q6STE5 483 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 WDR88Q6ZMY6 472 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 DPY19L2P2Q6ZN68 376 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 ESPNLQ6ZVH7 1005 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 HDDC2Q7Z4H3 204 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 THAP5Q7Z6K1 395 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SYT9Q86SS6 491 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 OAFQ86UD1 273 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 PM20D2Q8IYS1 436 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 HS3ST5Q8IZT8 346 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 CADM2Q8N3J6 435 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 LNX2Q8N448 690 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 GATSQ8NAP1 163 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 OR2T33Q8NG76 320 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 OR9Q2Q8NGE9 314 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 OR52L1Q8NGH7 329 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 TEX47Q8TBZ9 253 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 TMEM255BQ8WV15 326 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 GTPBP3Q969Y2 492 aaKnown RBP5.87□□□□□ -1.47
CDCA3-209ENST00000544610 PLPPR2Q96GM1 343 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SH3YL1Q96HL8 342 aaPredicted RBP5.87□□□□□ -1.47
CDCA3-209ENST00000544610 C18orf12Q96KH6 178 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 Q96MT0 163 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 SLC38A2Q96QD8 506 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 MBOAT4Q96T53 435 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 TIMP4Q99727 224 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 NIPSNAP1Q9BPW8 284 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 DSN1Q9H410 356 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 GP6Q9HCN6 339 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 NANSQ9NR45 359 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 PLCXD1Q9NUJ7 323 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 JKAMPQ9P055 326 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 MED11Q9P086 117 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 RHCGQ9UBD6 479 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 BLOC1S6Q9UL45 172 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 TMED7Q9Y3B3 224 aa5.87□□□□□ -1.47
CDCA3-209ENST00000544610 MAGED1Q9Y5V3 778 aaPredicted RBP5.87□□□□□ -1.47
CDCA3-209ENST00000544610 PRRC2AP48634 2157 aaKnown RBP5.87□□□□□ -1.47
CDCA3-209ENST00000544610 MAP1AP78559 2803 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms