RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 UPK3AO75631 287 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 KRT33AO76009 404 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 CNOT4O95628 575 aaKnown RBP12.03□□□□□ -0.48
SP140-213ENST00000543928 ADAP00813 363 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 IGHMP01871 453 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 CD14P08571 375 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ANXA8P13928 327 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ZNF23P17027 643 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 GSTM3P21266 225 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 CD79BP40259 229 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ERVK-25P63136 954 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 FAM27E3Q08E93 113 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 FAPQ12884 760 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 RFX4Q33E94 735 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ARMC4Q5T2S8 1044 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ZNF620Q6ZNG0 422 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 Q6ZT83 130 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ZNF771Q7L3S4 317 aaPredicted RBP12.03□□□□□ -0.48
SP140-213ENST00000543928 KIF18BQ86Y91 864 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 HIPK1Q86Z02 1210 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 GABRG1Q8N1C3 465 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ATG16L2Q8NAA4 619 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 POMGNT2Q8NAT1 580 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ICA1LQ8NDH6 482 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 OR6X1Q8NH79 312 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ASB10Q8WXI3 467 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 PSMG3-AS1Q96PY0 264 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 TSPAN32Q96QS1 320 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 KATNB1Q9BVA0 655 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 EGLN3Q9H6Z9 239 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ASB6Q9NWX5 421 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 MALT1Q9UDY8 824 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 ADAM18Q9Y3Q7 739 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 CDH10Q9Y6N8 788 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 COL12A1Q99715 3063 aa12.02□□□□□ -0.48
SP140-213ENST00000543928 SAC3D1A6NKF1 404 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 SLC6A6P31641 620 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 CSNK1A1P48729 337 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 RPL27P61353 136 aaKnown RBP12.02□□□□□ -0.49
SP140-213ENST00000543928 P2RY6Q15077 328 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 ANKRD34AQ69YU3 496 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 RPL13AP3Q6NVV1 102 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 CD300LDQ6UXZ3 194 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 DPY19L2P2Q6ZN68 376 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 RASSF6Q6ZTQ3 369 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 HDDC2Q7Z4H3 204 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 CXorf67Q86X51 503 aaPredicted RBP12.02□□□□□ -0.49
SP140-213ENST00000543928 ZDHHC13Q8IUH4 622 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 C20orf196Q8IYI0 205 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 GPR137CQ8N3F9 429 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 SVOPLQ8N434 492 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 OR6N1Q8NGY5 312 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 ZNF566Q969W8 418 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 SLC25A44Q96H78 314 aaPredicted RBP12.02□□□□□ -0.49
SP140-213ENST00000543928 SAMD8Q96LT4 415 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 ALKBH3Q96Q83 286 aaPredicted RBP12.02□□□□□ -0.49
SP140-213ENST00000543928 GPX7Q96SL4 187 aaPredicted RBP12.02□□□□□ -0.49
SP140-213ENST00000543928 LINC00470Q9BZP3 86 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 ZNF556Q9HAH1 456 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 KIF17Q9P2E2 1029 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 ZNF346Q9UL40 294 aaKnown RBP12.02□□□□□ -0.49
SP140-213ENST00000543928 OAZ3Q9UMX2 235 aa12.02□□□□□ -0.49
SP140-213ENST00000543928 ZNF587BE7ETH6 402 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 M0R3G1 203 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 PDLIM1O00151 329 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 LYZL6O75951 148 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 SOX14O95416 240 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 PPP1R3DO95685 299 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 BAG2O95816 211 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 IGHG1P01857 330 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 IGFBP1P08833 259 aaPredicted RBP12.01□□□□□ -0.49
SP140-213ENST00000543928 PGA4P0DJD7 388 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 PGA3P0DJD8 388 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 ACADSP16219 412 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 COX5AP20674 150 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 IGHV1-2P23083 117 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 CCKARP32238 428 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 UGT2B10P36537 528 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 ACVR1BP36896 505 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 PCYT1AP49585 367 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 FOXG1P55316 489 aaPredicted RBP12.01□□□□□ -0.49
SP140-213ENST00000543928 RUNX1T1Q06455 604 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 COX10Q12887 443 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 ITGADQ13349 1161 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 SNTB1Q13884 538 aaKnown RBP12.01□□□□□ -0.49
SP140-213ENST00000543928 TSC22D1Q15714 1073 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 CLEC12AQ5QGZ9 265 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 PHYHD1Q5SRE7 291 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 FAHD1Q6P587 224 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 KLHL17Q6TDP4 642 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 STAC2Q6ZMT1 411 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 LINGO2Q7L985 606 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 FAM122BQ7Z309 247 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 ABHD12BQ7Z5M8 362 aaPredicted RBP12.01□□□□□ -0.49
SP140-213ENST00000543928 PQLC1Q8N2U9 271 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 CLDN22Q8N7P3 220 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 OR52L1Q8NGH7 329 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 ZNF519Q8TB69 540 aa12.01□□□□□ -0.49
SP140-213ENST00000543928 HDAC2Q92769 488 aaKnown RBP12.01□□□□□ -0.49
SP140-213ENST00000543928 LRR1Q96L50 414 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms