RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 GTF2H4Q92759 462 aa19.43■□□□□ 0.7
CDKN3-207ENST00000543789 SLC47A1Q96FL8 570 aa19.43■□□□□ 0.7
CDKN3-207ENST00000543789 TXNDC15Q96J42 360 aa19.43■□□□□ 0.7
CDKN3-207ENST00000543789 EPYCQ99645 322 aa19.43■□□□□ 0.7
CDKN3-207ENST00000543789 ASPNQ9BXN1 380 aa19.43■□□□□ 0.7
CDKN3-207ENST00000543789 PAIP1Q9H074 479 aaKnown RBP19.43■□□□□ 0.7
CDKN3-207ENST00000543789 LPAR2Q9HBW0 351 aa19.43■□□□□ 0.7
CDKN3-207ENST00000543789 SELENONQ9NZV5 590 aa19.43■□□□□ 0.7
CDKN3-207ENST00000543789 FAM157AC9JC47 383 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 UBDO15205 165 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 RAB36O95755 333 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 MSMBP08118 114 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 B4GALT1P15291 398 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 GIPRP48546 466 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 WDR4P57081 412 aaKnown RBP19.42■□□□□ 0.7
CDKN3-207ENST00000543789 MRPS11P82912 194 aaKnown RBP19.42■□□□□ 0.7
CDKN3-207ENST00000543789 PMS2P3Q13401 168 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 CAMK2DQ13557 499 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 FXNQ16595 210 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 NHLRC1Q6VVB1 395 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 SEMA6DQ8NFY4 1073 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 OR6N1Q8NGY5 312 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 RNF217Q8TC41 542 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 ZBTB9Q96C00 473 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 ULBP2Q9BZM5 246 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 MED29Q9NX70 200 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 TREM2Q9NZC2 230 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 DUSP13Q9UII6 198 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 FZR1Q9UM11 496 aa19.42■□□□□ 0.7
CDKN3-207ENST00000543789 WNT9BO14905 357 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 GAAP10253 952 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 MAD2L1BPQ15013 274 aaPredicted RBP19.41■□□□□ 0.7
CDKN3-207ENST00000543789 SHQ1Q6PI26 577 aaKnown RBP19.41■□□□□ 0.7
CDKN3-207ENST00000543789 DHRS4L2Q6PKH6 230 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 COMTD1Q86VU5 262 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 MIER2Q8N344 545 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 OR51F2Q8NH61 342 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 ZNF418Q8TF45 676 aaPredicted RBP19.41■□□□□ 0.7
CDKN3-207ENST00000543789 YIPF5Q969M3 257 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 LRRC37BQ96QE4 947 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 FOXB1Q99853 325 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 SPATA5L1Q9BVQ7 753 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 TMEM27Q9HBJ8 222 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 ZNF275Q9NSD4 429 aaPredicted RBP19.41■□□□□ 0.7
CDKN3-207ENST00000543789 MRPL39Q9NYK5 338 aaKnown RBP19.41■□□□□ 0.7
CDKN3-207ENST00000543789 ZNF224Q9NZL3 707 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 MYEF2Q9P2K5 600 aaKnown RBP19.41■□□□□ 0.7
CDKN3-207ENST00000543789 FBXL3Q9UKT7 428 aa19.41■□□□□ 0.7
CDKN3-207ENST00000543789 PPIHO43447 177 aaKnown RBP19.4■□□□□ 0.7
CDKN3-207ENST00000543789 TPST1O60507 370 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 UBL3O95164 117 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 BGLAPP02818 100 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 NAT2P11245 290 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 LSP1P33241 339 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 PUDPQ08623 228 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 SLC2A7Q6PXP3 512 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 PXKQ7Z7A4 578 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 KRT73Q86Y46 540 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 WDFY1Q8IWB7 410 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 C10orf53Q8N6V4 93 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 NFKBIDQ8NI38 313 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 OR52B2Q96RD2 323 aa19.4■□□□□ 0.7
CDKN3-207ENST00000543789 ZNF346Q9UL40 294 aaKnown RBP19.4■□□□□ 0.7
CDKN3-207ENST00000543789 AHCYP23526 432 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 NCALDP61601 193 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 RAB39AQ14964 217 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 OR1Q1Q15612 314 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 GLIPR1L2Q4G1C9 344 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 GCNT6Q5T4J0 391 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 REEP3Q6NUK4 255 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 FAHD2BQ6P2I3 314 aaPredicted RBP19.39■□□□□ 0.69
CDKN3-207ENST00000543789 MAVSQ7Z434 540 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 GOLGA6L1Q8N7Z2 621 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 FAHD2AQ96GK7 314 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 MOGAT1Q96PD6 335 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 ZNF416Q9BWM5 594 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 ZNF385DQ9H6B1 395 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 SLC7A8Q9UHI5 535 aa19.39■□□□□ 0.69
CDKN3-207ENST00000543789 A0A0B4J2E0 115 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 A0A1B0GX12 115 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 A0A1W2PPW3 197 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 PLPP3O14495 311 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 SPRY1O43609 319 aaPredicted RBP19.38■□□□□ 0.69
CDKN3-207ENST00000543789 SERPINA5P05154 406 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 ARAFP10398 606 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 CSNK1A1P48729 337 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 LMO4P61968 165 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 ACTG1P63261 375 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 CDK6Q00534 326 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 MYBPC1Q00872 1141 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 PIWIL3Q7Z3Z3 882 aaKnown RBP19.38■□□□□ 0.69
CDKN3-207ENST00000543789 CROCCP2Q86T23 111 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 SKA3Q8IX90 412 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 TESQ9UGI8 421 aaKnown RBP19.38■□□□□ 0.69
CDKN3-207ENST00000543789 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.38■□□□□ 0.69
CDKN3-207ENST00000543789 PCDHB10Q9UN67 800 aa19.38■□□□□ 0.69
CDKN3-207ENST00000543789 V9GYY5 206 aaPredicted RBP19.38■□□□□ 0.69
CDKN3-207ENST00000543789 TRAV20A0A0B4J274 112 aa19.37■□□□□ 0.69
CDKN3-207ENST00000543789 TMEM120BA0PK00 339 aa19.37■□□□□ 0.69
CDKN3-207ENST00000543789 LRRN3E7EW58 273 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms