RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 GPRC6AQ5T6X5 926 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 ZC2HC1BQ5TFG8 222 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 RNLSQ5VYX0 342 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 HIST2H2AA3Q6FI13 130 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 OR5M10Q6IEU7 315 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 CASC4Q6P4E1 433 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 ATRAIDQ6UW56 229 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 FAM122BQ7Z309 247 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 TRMT11Q7Z4G4 463 aaKnown RBP3.53□□□□□ -1.84
MDM2-229ENST00000543046 ANKRD46Q86W74 232 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 TMEM17Q86X19 198 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 FUNDC1Q8IVP5 155 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 PYROXD2Q8N2H3 581 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 ZNF561Q8N587 486 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 CLDN22Q8N7P3 220 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 ZNF540Q8NDQ6 660 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 C19orf18Q8NEA5 215 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 OR4F6Q8NGB9 312 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 OR10J5Q8NHC4 309 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 AKR7LQ8NHP1 331 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 HPSE2Q8WWQ2 592 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 UCN3Q969E3 161 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 SLAMF9Q96A28 289 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 EXOSC8Q96B26 276 aaKnown RBP3.53□□□□□ -1.84
MDM2-229ENST00000543046 MRPS24Q96EL2 167 aaKnown RBP3.53□□□□□ -1.84
MDM2-229ENST00000543046 NARS2Q96I59 477 aaKnown RBP3.53□□□□□ -1.84
MDM2-229ENST00000543046 C14orf144Q96I85 54 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 ZBED3Q96IU2 234 aaPredicted RBP3.53□□□□□ -1.84
MDM2-229ENST00000543046 SFXN2Q96NB2 322 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 ZNF558Q96NG5 402 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 LRRC3BQ96PB8 259 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 RNF157Q96PX1 679 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 CCNL2Q96S94 520 aaPredicted RBP3.53□□□□□ -1.84
MDM2-229ENST00000543046 PFDN5Q99471 154 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 CDCA3Q99618 268 aaPredicted RBP3.53□□□□□ -1.84
MDM2-229ENST00000543046 PITX2Q99697 317 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 SSX3Q99909 188 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 EGFL8Q99944 293 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 THUMPD3Q9BV44 507 aaKnown RBP3.53□□□□□ -1.84
MDM2-229ENST00000543046 EDEM2Q9BV94 578 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 KATNB1Q9BVA0 655 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 ERVK-6Q9BXR3 956 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 BEX2Q9BXY8 128 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 GFRA4Q9GZZ7 299 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 EML4Q9HC35 981 aaKnown RBP3.53□□□□□ -1.84
MDM2-229ENST00000543046 NANSQ9NR45 359 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 AGPAT3Q9NRZ7 376 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 ABCB8Q9NUT2 735 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 CACNG4Q9UBN1 327 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 SEC14L3Q9UDX4 400 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 CACNG5Q9UF02 275 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 OR12D3Q9UGF7 316 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 PSORS1C1Q9UIG5 152 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 POMT2Q9UKY4 750 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 AGTPBP1Q9UPW5 1226 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 NCKAP1Q9Y2A7 1128 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 TAF1LQ8IZX4 1826 aa3.53□□□□□ -1.84
MDM2-229ENST00000543046 COL24A1Q17RW2 1714 aa3.53□□□□□ -1.85
MDM2-229ENST00000543046 DDX60LQ5H9U9 1706 aaKnown RBP3.53□□□□□ -1.85
MDM2-229ENST00000543046 A0A087WW49 117 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 A0A1W2PP18 115 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 TRAPPC13A5PLN9 417 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 ANKRD61A6NGH8 418 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 FAM74A7A6NL05 159 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 HMSDA8MTL9 139 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 DFFAO00273 331 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 GPR171O14626 319 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 LYRM1O43325 122 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 SLC37A4O43826 429 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 KIAA0513O60268 411 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 TPST1O60507 370 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 SDC3O75056 442 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 CBR3O75828 277 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 AQP8O94778 261 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 OR4F21O95013 312 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 GADD45GO95257 159 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 NSA2O95478 260 aaKnown RBP3.52□□□□□ -1.85
MDM2-229ENST00000543046 RAB3DO95716 219 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 CFDP00746 253 aaPredicted RBP3.52□□□□□ -1.85
MDM2-229ENST00000543046 OPN1LWP04000 364 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 CRYBA1P05813 215 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 CRHP06850 196 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 KLK3P07288 261 aaPredicted RBP3.52□□□□□ -1.85
MDM2-229ENST00000543046 CHRNGP07510 517 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 FGF4P08620 206 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 OR4E1P0C645 316 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 LINC00614P0C842 121 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 SULT1A3P0DMM9 295 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 SULT1A4P0DMN0 295 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 CLUP10909 449 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 MUC1P15941 1255 aaPredicted RBP3.52□□□□□ -1.85
MDM2-229ENST00000543046 PVALBP20472 110 aaPredicted RBP3.52□□□□□ -1.85
MDM2-229ENST00000543046 CYP2B6P20813 491 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 PTPN3P26045 913 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 MAPK3P27361 379 aaPredicted RBP3.52□□□□□ -1.85
MDM2-229ENST00000543046 YWHABP31946 246 aaKnown RBP3.52□□□□□ -1.85
MDM2-229ENST00000543046 PTGFRP43088 359 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 HTR5AP47898 357 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 GCLMP48507 274 aa3.52□□□□□ -1.85
MDM2-229ENST00000543046 LHX1P48742 406 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms