RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 MSX1P28360 303 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 CD300CQ08708 224 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 ASAH1Q13510 395 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 PLPPR5Q32ZL2 321 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 SLC25A35Q3KQZ1 300 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 ZNF528Q3MIS6 628 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 SLC6A19Q695T7 634 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 SFXN4Q6P4A7 337 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 MZT2AQ6P582 158 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 PAMR1Q6UXH9 720 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 NHLRC1Q6VVB1 395 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 WDFY1Q8IWB7 410 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 MFSD8Q8NHS3 518 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 HSD17B8Q92506 261 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 SPACA9Q96E40 222 aaPredicted RBP12.76□□□□□ -0.37
LDB3-207ENST00000542786 ARL5BQ96KC2 179 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 MNTQ99583 582 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 PDCD1LG2Q9BQ51 273 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 WDR76Q9H967 626 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 B3GAT2Q9NPZ5 323 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 B9D1Q9UPM9 204 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 WIF1Q9Y5W5 379 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 FKBP7Q9Y680 259 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 VCANP13611 3396 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 TRBV2A0A0J9YWF9 115 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 TEX51A0A1B0GUA7 166 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 B4E171 279 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 MS4A18H0YCH9 400 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 ARHGEF9O43307 516 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 GATBO75879 557 aaKnown RBP12.76□□□□□ -0.37
LDB3-207ENST00000542786 GPANK1O95872 356 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 DLGAP3O95886 979 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 ELK1P19419 428 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 MYL9P24844 172 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 APEX1P27695 318 aaKnown RBP12.76□□□□□ -0.37
LDB3-207ENST00000542786 CCKBRP32239 447 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 TSPAN7P41732 249 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 TMED10P49755 219 aaKnown RBP12.76□□□□□ -0.37
LDB3-207ENST00000542786 P2RY14Q15391 338 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 MS4A18Q3C1V0 323 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 KCTD20Q7Z5Y7 419 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 SCAIQ8N9R8 606 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 SLC22A8Q8TCC7 542 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 MR1Q95460 341 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 KLHL15Q96M94 604 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 DEFB126Q9BYW3 111 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 HS3ST3B1Q9Y662 390 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 SLC22A23A1A5C7 686 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 NPIPB13A6NJU9 1138 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 NPIPB4C9JG80 1138 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 PSMD9O00233 223 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 SLC19A2O60779 497 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 ZFPL1O95159 310 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 PLGP00747 810 aaPredicted RBP12.75□□□□□ -0.37
LDB3-207ENST00000542786 OR8G3PP0DMU2 310 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 IMPDH2P12268 514 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 MPLP40238 635 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 IDNKQ5T6J7 187 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 FADS6Q8N9I5 356 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 OR2M3Q8NG83 312 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 CHAC2Q8WUX2 184 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 PHYHIPQ92561 330 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 MRGPRX4Q96LA9 322 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 FRMD6Q96NE9 622 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 OR14A2Q96R54 314 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 INTS14Q96SY0 518 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 AMELYQ99218 206 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 CYSLTR2Q9NS75 346 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 MRPL22Q9NWU5 206 aaKnown RBP12.75□□□□□ -0.37
LDB3-207ENST00000542786 RASD1Q9Y272 281 aa12.75□□□□□ -0.37
LDB3-207ENST00000542786 CHCHD2Q9Y6H1 151 aaPredicted RBP12.75□□□□□ -0.37
LDB3-207ENST00000542786 ANKRD61A6NGH8 418 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 LIPT2A6NK58 231 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 SHISA8B8ZZ34 492 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 PLA2G10O15496 165 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 TMCC2O75069 709 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 LDOC1O95751 146 aaPredicted RBP12.74□□□□□ -0.37
LDB3-207ENST00000542786 KLK3P07288 261 aaPredicted RBP12.74□□□□□ -0.37
LDB3-207ENST00000542786 HLA-DOBP13765 273 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 CTLA4P16410 223 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 CASP3P42574 277 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 CD97P48960 835 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 LIPNQ5VXI9 398 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 SPATC1Q76KD6 591 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 NRARPQ7Z6K4 114 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 CELF2-AS1Q8N7Q2 184 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 IL17RDQ8NFM7 739 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 OR2Y1Q8NGV0 311 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 GFI1Q99684 422 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 POTEKPQ9BYX7 375 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 ULBP3Q9BZM4 244 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.74□□□□□ -0.37
LDB3-207ENST00000542786 FANCFQ9NPI8 374 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 ANKRD10Q9NXR5 420 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 KLRF1Q9NZS2 232 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 PPP4R1LQ9P1A2 415 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 GPN3Q9UHW5 284 aaPredicted RBP12.74□□□□□ -0.37
LDB3-207ENST00000542786 PTRH2Q9Y3E5 179 aaKnown RBP12.74□□□□□ -0.37
LDB3-207ENST00000542786 XKRYO14609 159 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 TRIM3O75382 744 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms