RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 VSX1Q9NZR4 365 aaPredicted RBP11.85□□□□□ -0.51
CHFR-221ENST00000542714 SPRR3Q9UBC9 169 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 CLEC2DQ9UHP7 191 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 RASD1Q9Y272 281 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 URB1O60287 2271 aaKnown RBP11.85□□□□□ -0.51
CHFR-221ENST00000542714 ALPK2Q86TB3 2170 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 ACACAQ13085 2346 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 DNAJC13O75165 2243 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 PIEZO1Q92508 2521 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 PRSS37A4D1T9 235 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 A6NIZ1 184 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 SLC22A31A6NKX4 558 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 C1QTNF9BB2RNN3 333 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 NPIPA5E9PKD4 350 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 ARHGEF9O43307 516 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 CXCL13O43927 109 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 EIF1BO60739 113 aaKnown RBP11.84□□□□□ -0.51
CHFR-221ENST00000542714 INMTO95050 263 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 RAB36O95755 333 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 PTHP01270 115 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 IGHA1P01876 353 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 LCKP06239 509 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 C1QTNF9P0C862 333 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 ZNF708P17019 499 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 ENPP1P22413 925 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 PYCR1P32322 319 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 ETV1P50549 477 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 DAP3P51398 398 aaKnown RBP11.84□□□□□ -0.51
CHFR-221ENST00000542714 TMPRSS3P57727 454 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 RAC3P60763 192 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 RAP1BP61224 184 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 RPS7P62081 194 aaKnown RBP11.84□□□□□ -0.51
CHFR-221ENST00000542714 RAP1AP62834 184 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 GGTLC2Q14390 218 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 RAB39AQ14964 217 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 LINC01590Q5TEZ4 76 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 UBE2UQ5VVX9 321 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 RNLSQ5VYX0 342 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 LYPD4Q6UWN0 246 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 UEVLDQ8IX04 471 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 OR51L1Q8NGJ5 315 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 OR10D3Q8NH80 312 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 NEIL3Q8TAT5 605 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 TM9SF4Q92544 642 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 ZNF649Q9BS31 505 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 NAA11Q9BSU3 229 aaPredicted RBP11.84□□□□□ -0.51
CHFR-221ENST00000542714 RBM38Q9H0Z9 239 aaKnown RBP11.84□□□□□ -0.51
CHFR-221ENST00000542714 TSPAN10Q9H1Z9 355 aaPredicted RBP11.84□□□□□ -0.51
CHFR-221ENST00000542714 SYT4Q9H2B2 425 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 ADGRL4Q9HBW9 690 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 HAO2Q9NYQ3 351 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 KLHL13Q9P2N7 655 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 NPIPA1Q9UND3 350 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 LSM2Q9Y333 95 aaKnown RBP11.84□□□□□ -0.51
CHFR-221ENST00000542714 NOX1Q9Y5S8 564 aa11.84□□□□□ -0.51
CHFR-221ENST00000542714 IRGMA1A4Y4 181 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 SLC22A23A1A5C7 686 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 ZNF99A8MXY4 864 aaPredicted RBP11.83□□□□□ -0.52
CHFR-221ENST00000542714 M0R3G1 203 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 XKRYO14609 159 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 TRMUO75648 421 aaKnown RBP11.83□□□□□ -0.52
CHFR-221ENST00000542714 WISP2O76076 250 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 GLCEO94923 617 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 BCL10O95999 233 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 RENP00797 406 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 IGHG3P01860 377 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 EIF1AXP47813 144 aaKnown RBP11.83□□□□□ -0.52
CHFR-221ENST00000542714 BIDP55957 195 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 CARD18P57730 90 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 POU4F3Q15319 338 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 SLC35D3Q5M8T2 416 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 EEF1A1P5Q5VTE0 462 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 FAM205BPQ63HN1 556 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 VASNQ6EMK4 673 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 TMEM225Q6GV28 225 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 ABLIM2Q6H8Q1 611 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 LRRC69Q6ZNQ3 347 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 OR6V1Q8N148 313 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 OR51G2Q8NGK0 314 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 C9orf43Q8TAL5 461 aaPredicted RBP11.83□□□□□ -0.52
CHFR-221ENST00000542714 ROBO4Q8WZ75 1007 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 EXTL1Q92935 676 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 ABTB1Q969K4 478 aaPredicted RBP11.83□□□□□ -0.52
CHFR-221ENST00000542714 NMD3Q96D46 503 aaKnown RBP11.83□□□□□ -0.52
CHFR-221ENST00000542714 ZMYND19Q96E35 227 aaPredicted RBP11.83□□□□□ -0.52
CHFR-221ENST00000542714 ZNF845Q96IR2 970 aaPredicted RBP11.83□□□□□ -0.52
CHFR-221ENST00000542714 TAAR6Q96RI8 345 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 EMC6Q9BV81 110 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 JAM3Q9BX67 310 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 VCX3AQ9NNX9 186 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 PCDHGB7Q9Y5F8 929 aa11.83□□□□□ -0.52
CHFR-221ENST00000542714 IGLV1-36A0A0B4J1U3 117 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 TRGV5A0A0B4J1U4 118 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 ZNF716A6NP11 495 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 FAM171A2A8MVW0 826 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 MKRN2OSH3BPM6 223 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 TFECO14948 347 aaPredicted RBP11.82□□□□□ -0.52
CHFR-221ENST00000542714 SEC14L2O76054 403 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 ACTL6AO96019 429 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms