RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 GPANK1O95872 356 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 P04436 131 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 NAGAP17050 411 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 M6PRP20645 277 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 PCMT1P22061 227 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 AHCYP23526 432 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 DPP4P27487 766 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 RPL4P36578 427 aaKnown RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 IFNGR2P38484 337 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 STARP49675 285 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 POLR2HP52434 150 aaKnown RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 CTBP2P56545 445 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 DEFA1P59665 94 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 DEFA3P59666 94 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 CDC42P60953 191 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 TUBA1BP68363 451 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 MELKQ14680 651 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 OR7A5Q15622 319 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 PGGHGQ32M88 737 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 WIPI1Q5MNZ9 446 aaPredicted RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 ZNF544Q6NX49 715 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 PLBD1Q6P4A8 553 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 PAQR6Q6TCH4 344 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 TMPRSS11FQ6ZWK6 438 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 USP43Q70EL4 1123 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 TUBA1AQ71U36 451 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 GALNTL5Q7Z4T8 443 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 LYSMD2Q8IV50 215 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 CDK20Q8IZL9 346 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 SPERTQ8NA61 448 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 OR4K13Q8NH42 304 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 ZNRF4Q8WWF5 429 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 NXPE2Q96DL1 559 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 YIPF6Q96EC8 236 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 C1GALT1C1Q96EU7 318 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 LRR1Q96L50 414 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 TSSK2Q96PF2 358 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 ERMAPQ96PL5 475 aaPredicted RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 KATNB1Q9BVA0 655 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 ANGPTL4Q9BY76 406 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 NANSQ9NR45 359 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 IL20Q9NYY1 176 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 WASF3Q9UPY6 502 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 GRIP1Q9Y3R0 1128 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 IER3IP1Q9Y5U9 82 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 CACNA1CQ13936 2221 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 FAM25AB3EWG3 89 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 FAM25CB3EWG5 89 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 FAM25GB3EWG6 89 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 SURF4O15260 269 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 SEC14L5O43304 696 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 PTP4A3O75365 173 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 AKR7A3O95154 331 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 SNX4O95219 450 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 BGLAPP02818 100 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 MT-ND2P03891 347 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 STSP08842 583 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 MRPL3P09001 348 aaKnown RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 HIST1H1CP16403 213 aaKnown RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 GSTM3P21266 225 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 NR4A1P22736 598 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 GDF1P27539 372 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 NTF4P34130 210 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 SLC6A8P48029 635 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 SMSP52788 366 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 SLC16A1P53985 500 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 RPL18Q07020 188 aaKnown RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 C3AR1Q16581 482 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 SYT14P1Q58G82 188 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 C1orf140Q5VVS0 124 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 AGAP6Q5VW22 663 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 RSBN1Q5VWQ0 802 aaPredicted RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 CD300LDQ6UXZ3 194 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 RTL4Q6ZR62 310 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 GRINAQ7Z429 371 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 ZBTB46Q86UZ6 589 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 P2RY8Q86VZ1 359 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 PLCZ1Q86YW0 608 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 CPOQ8IVL8 374 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 SETD9Q8NE22 299 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 KCNE4Q8WWG9 221 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 NR4A3Q92570 626 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 RORBQ92753 470 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 Q96M85 177 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 C5orf34Q96MH7 638 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 AGAP4Q96P64 663 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 OR5B2Q96R09 309 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 UTP23Q9BRU9 249 aaKnown RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 TAPBPLQ9BX59 468 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 MMP27Q9H306 513 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 RERGLQ9H628 205 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 ZNF552Q9H707 407 aaPredicted RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 CCNB1IP1Q9NPC3 277 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 HINT3Q9NQE9 182 aaKnown RBP6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 CHRNA9Q9UGM1 479 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 DKKL1Q9UK85 242 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 SLC6A5Q9Y345 797 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 HSPE1-MOB4S4R3N1 261 aa6.94□□□□□ -1.3
AC005840.3-201ENST00000541888 PTPRQQ9UMZ3 2332 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms