RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ABHD17BQ5VST6 288 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 GPR107Q5VW38 600 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 ADAM5Q6NVV9 412 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 RFPL4BQ6ZWI9 263 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 ATG4DQ86TL0 474 aaPredicted RBP4.83□□□□□ -1.64
DDB1-219ENST00000541513 ZFAND4Q86XD8 727 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 CATSPERDQ86XM0 798 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 PLD3Q8IV08 490 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 ARHGEF19Q8IW93 802 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 MCOLN2Q8IZK6 566 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 CSNK1A1LQ8N752 337 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 ZNF248Q8NDW4 579 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 B3GNT7Q8NFL0 401 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 OR4C15Q8NGM1 316 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 OR52E5Q8NH55 327 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 C8orf46Q8TAG6 207 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 DTD1Q8TEA8 209 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 PYDC1Q8WXC3 89 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 PIGTQ969N2 578 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 DUS3LQ96G46 650 aaKnown RBP4.83□□□□□ -1.64
DDB1-219ENST00000541513 PCED1BQ96HM7 432 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 TXNDC15Q96J42 360 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 C9orf72Q96LT7 481 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 GNRHR2Q96P88 292 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 FMO2Q99518 471 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 CDX2Q99626 313 aaPredicted RBP4.83□□□□□ -1.64
DDB1-219ENST00000541513 SLC6A7Q99884 636 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 ZNF251Q9BRH9 671 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 C7orf50Q9BRJ6 194 aaKnown RBP4.83□□□□□ -1.64
DDB1-219ENST00000541513 RPP25Q9BUL9 199 aaKnown RBP4.83□□□□□ -1.64
DDB1-219ENST00000541513 PAPOLGQ9BWT3 736 aaKnown RBP4.83□□□□□ -1.64
DDB1-219ENST00000541513 SRRQ9GZT4 340 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 SLC22A4Q9H015 551 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 SLITRK2Q9H156 845 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 NEUROG2Q9H2A3 272 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 SP140LQ9H930 580 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 APOBEC3GQ9HC16 384 aaKnown RBP4.83□□□□□ -1.64
DDB1-219ENST00000541513 S100A14Q9HCY8 104 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 DIABLOQ9NR28 239 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 TESQ9UGI8 421 aaKnown RBP4.83□□□□□ -1.64
DDB1-219ENST00000541513 WARS2Q9UGM6 360 aaKnown RBP4.83□□□□□ -1.64
DDB1-219ENST00000541513 CLEC2DQ9UHP7 191 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 ENOPH1Q9UHY7 261 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 ZDHHC2Q9UIJ5 367 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 ZNF221Q9UK13 617 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 PAM16Q9Y3D7 125 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 URGCP-MRPS24S4R325 110 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 V9GYQ6 96 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 MYO10Q9HD67 2058 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 OBSL1O75147 1896 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 DENND4AQ7Z401 1863 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 MYO16Q9Y6X6 1858 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 C5orf42Q9H799 3197 aa4.83□□□□□ -1.64
DDB1-219ENST00000541513 MN1Q10571 1320 aaPredicted RBP4.82□□□□□ -1.64
DDB1-219ENST00000541513 TRBV5-5A0A0J9YX44 114 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 A0A1B0GTI1 187 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 A0A1B0GTL3 188 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 A0A1B0GW15 77 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 CLEC18AA5D8T8 446 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 GAGE12JA6NER3 117 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 HIDE1A8MVS5 230 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 E5RI56 91 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 PRAMEF26H0Y7S4 382 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 SIRPB1O00241 398 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 SLC9A3R1O14745 358 aaPredicted RBP4.82□□□□□ -1.64
DDB1-219ENST00000541513 BET1O15155 118 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 CFLARO15519 480 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 EFNA2O43921 213 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 CNOT3O75175 753 aaKnown RBP4.82□□□□□ -1.64
DDB1-219ENST00000541513 FCN3O75636 299 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 KRT33AO76009 404 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 AP2A2O94973 939 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 DHFRP00374 187 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 CRYABP02511 175 aaKnown RBP4.82□□□□□ -1.64
DDB1-219ENST00000541513 GPIP06744 558 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 KRT16P08779 473 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 COX5BP10606 129 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 PSKH1P11801 424 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 H2AFXP16104 143 aaPredicted RBP4.82□□□□□ -1.64
DDB1-219ENST00000541513 CSKP41240 450 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 SLC1A2P43004 574 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 MAGOHP61326 146 aaKnown RBP4.82□□□□□ -1.64
DDB1-219ENST00000541513 CHRNB3Q05901 458 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 SELENBP1Q13228 472 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 GPR17Q13304 367 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 MFAP5Q13361 173 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 GTDC1Q4AE62 458 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 XKR6Q5GH73 641 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 SLC35D3Q5M8T2 416 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 LY6G6FQ5SQ64 297 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 PIK3CD-AS1Q5SR53 167 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 SPOPLQ6IQ16 392 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 RHBDF2Q6PJF5 856 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 CLEC18BQ6UXF7 455 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 Q6ZSR3 168 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 FAM57BQ71RH2 274 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 UNC93AQ86WB7 457 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 LINC00518Q8N0U6 118 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 ELMOD1Q8N336 334 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 DHRSXQ8N5I4 330 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms