RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 C11orf98E9PRG8 122 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 ABCD4O14678 606 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 ARPC2O15144 300 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 CLOCKO15516 846 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 RNF13O43567 381 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 PIP5K1CO60331 668 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 SEMG1P04279 462 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 UMPSP11172 480 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 PAX1P15863 534 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 FUT1P19526 365 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 CALB2P22676 271 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 YAP1P46937 504 aaKnown RBP11.46□□□□□ -0.57
LTBR-208ENST00000541005 ZNF83P51522 516 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 BIDP55957 195 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 RPS4XP62701 263 aaKnown RBP11.46□□□□□ -0.57
LTBR-208ENST00000541005 CEACAM16Q2WEN9 425 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 C3orf36Q3SXR2 165 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 PHYHD1Q5SRE7 291 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 SLC35D2Q76EJ3 337 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 CYP4Z1Q86W10 505 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 RNF113BQ8IZP6 322 aaKnown RBP11.46□□□□□ -0.57
LTBR-208ENST00000541005 LRRC75A-AS1Q8N1F1 130 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 FAM86B1Q8N7N1 296 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 TMEM54Q969K7 222 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 FBXW5Q969U6 566 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 BPIFA2Q96DR5 249 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 NSL1Q96IY1 281 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 DHRS1Q96LJ7 313 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 SEPHS2Q99611 448 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 EMC6Q9BV81 110 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 NMNAT1Q9HAN9 279 aaPredicted RBP11.46□□□□□ -0.57
LTBR-208ENST00000541005 B3GAT2Q9NPZ5 323 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 HIF3AQ9Y2N7 669 aa11.46□□□□□ -0.57
LTBR-208ENST00000541005 A0A1W2PRQ8 180 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 B2RBV5 119 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 CENPBD1B2RD01 187 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 M0R3G1 203 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 IGLV1-44P01699 117 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 T-ENOLP0DO92 83 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 RHCEP18577 417 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 CDH2P19022 906 aaPredicted RBP11.45□□□□□ -0.58
LTBR-208ENST00000541005 TCN1P20061 433 aaPredicted RBP11.45□□□□□ -0.58
LTBR-208ENST00000541005 CSNK1A1P48729 337 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 LSM11P83369 360 aaKnown RBP eCLIP11.45□□□□□ -0.58
LTBR-208ENST00000541005 ARF1P84077 181 aaKnown RBP11.45□□□□□ -0.58
LTBR-208ENST00000541005 MXRA7P84157 204 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 VLDLRP98155 873 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 PRKCDQ05655 676 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 CAMK2DQ13557 499 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 DGCR6Q14129 220 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 ANKDD1AQ495B1 522 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 IQCCQ4KMZ1 466 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 MBOAT2Q6ZWT7 520 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 HDDC2Q7Z4H3 204 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 KRTAP1-3Q8IUG1 177 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 NRMQ8IXM6 262 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 CCDC36Q8IYA8 594 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 ZNF837Q96EG3 531 aaPredicted RBP11.45□□□□□ -0.58
LTBR-208ENST00000541005 SLC25A44Q96H78 314 aaPredicted RBP11.45□□□□□ -0.58
LTBR-208ENST00000541005 NSMCE2Q96MF7 247 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 STX18Q9P2W9 335 aaKnown RBP11.45□□□□□ -0.58
LTBR-208ENST00000541005 RHCGQ9UBD6 479 aa11.45□□□□□ -0.58
LTBR-208ENST00000541005 A0A087WUU8 490 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 BLOC1S5-TXNDC5H3BN57 136 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 M0R1B8 84 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 SMPD2O60906 423 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 SERPINI2O75830 405 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 IGKV3-15P01624 115 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 IGHMP01871 453 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 H1F0P07305 194 aaKnown RBP11.44□□□□□ -0.58
LTBR-208ENST00000541005 DANCRP0C864 163 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 PGA4P0DJD7 388 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 PGA3P0DJD8 388 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 IFI30P13284 250 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 MAKP20794 623 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 AQP2P41181 271 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 SLC9A3P48764 834 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 DAP3P51398 398 aaKnown RBP11.44□□□□□ -0.58
LTBR-208ENST00000541005 CDH11P55287 796 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 UBE2NP61088 152 aaKnown RBP11.44□□□□□ -0.58
LTBR-208ENST00000541005 SPOCK1Q08629 439 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 FHL1Q13642 323 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 TAF11Q15544 211 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 HIST3H3Q16695 136 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 CARD17Q5XLA6 110 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 ZNF730Q6ZMV8 503 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 OR6N1Q8NGY5 312 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 SLC7A13Q8TCU3 470 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 ASB10Q8WXI3 467 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 NEUROG1Q92886 237 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 ZNF566Q969W8 418 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 PYURFQ96I23 114 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 FUZQ9BT04 418 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 GSX2Q9BZM3 304 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 ULBP2Q9BZM5 246 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 GRIP2Q9C0E4 1043 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 MUC13Q9H3R2 512 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 INIPQ9NRY2 104 aa11.44□□□□□ -0.58
LTBR-208ENST00000541005 ZNF701Q9NV72 531 aaPredicted RBP11.44□□□□□ -0.58
LTBR-208ENST00000541005 GLTPQ9NZD2 209 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms