RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 APCDD1LQ8NCL9 501 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 OR52N1Q8NH53 320 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 SLC25A43Q8WUT9 341 aaPredicted RBP7.53□□□□□ -1.2
CHD4-208ENST00000540960 UBE2FQ969M7 185 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 TMIGD2Q96BF3 282 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 C3orf49Q96BT1 292 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 YIPF6Q96EC8 236 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 MRGPRX4Q96LA9 322 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 SNX18Q96RF0 628 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 MGLLQ99685 303 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 ASPNQ9BXN1 380 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 RNF32Q9H0A6 362 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
CHD4-208ENST00000540960 EGLN3Q9H6Z9 239 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 METTL7AQ9H8H3 244 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 SACM1LQ9NTJ5 587 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 PAK1IP1Q9NWT1 392 aaPredicted RBP7.53□□□□□ -1.2
CHD4-208ENST00000540960 STMN3Q9NZ72 180 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 DNAJC27Q9NZQ0 273 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 TEKT2Q9UIF3 430 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 EXOGQ9Y2C4 368 aaKnown RBP7.53□□□□□ -1.2
CHD4-208ENST00000540960 GSTK1Q9Y2Q3 226 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 CENPVL1A0A0U1RR11 272 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 OR2W5A6NFC9 320 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 CENPBD1B2RD01 187 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 BHLHE40O14503 412 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 SEC14L5O43304 696 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 SNX4O95219 450 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 HPP00738 406 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 UMODP07911 640 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 CD14P08571 375 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 TSPAN19P0C672 248 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 ADORA3P0DMS8 318 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 NR2C1P13056 603 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 MAKP20794 623 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 CALRP27797 417 aaKnown RBP7.52□□□□□ -1.21
CHD4-208ENST00000540960 GTF2E2P29084 291 aaKnown RBP7.52□□□□□ -1.21
CHD4-208ENST00000540960 TACR3P29371 465 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 RGS6P49758 472 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 SLC25A1P53007 311 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 NUDT6P53370 316 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 GP2P55259 537 aaKnown RBP7.52□□□□□ -1.21
CHD4-208ENST00000540960 WNT4P56705 351 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 ACTA2P62736 377 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 ACTG2P63267 376 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 ACSM1Q08AH1 577 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 MED22Q15528 200 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 NTRK2Q16620 822 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 BTBD16Q32M84 506 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 Q5PR19 223 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 FAM69AQ5T7M9 428 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 LANCL3Q6ZV70 420 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 SLC46A3Q7Z3Q1 461 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 NANOGNBQ7Z5D8 188 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 KCTD20Q7Z5Y7 419 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 JAZF1Q86VZ6 243 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 ARMC10Q8N2F6 343 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 IQCF1Q8N6M8 205 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 SCAIQ8N9R8 606 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 FAM98AQ8NCA5 519 aaKnown RBP7.52□□□□□ -1.21
CHD4-208ENST00000540960 LILRB4Q8NHJ6 448 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 ELP5Q8TE02 316 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 DDIT4LQ96D03 193 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 SPACA9Q96E40 222 aaPredicted RBP7.52□□□□□ -1.21
CHD4-208ENST00000540960 ZHX1-C8orf76Q96EF9 292 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 GPA33Q99795 319 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 PRR14Q9BWN1 585 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 POTEKPQ9BYX7 375 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 PALMDQ9NP74 551 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 MEPEQ9NQ76 525 aaPredicted RBP7.52□□□□□ -1.21
CHD4-208ENST00000540960 TAS2R10Q9NYW0 307 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 KLRF1Q9NZS2 232 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 PPP4R1LQ9P1A2 415 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 FBXL4Q9UKA2 621 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 SSR3Q9UNL2 185 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 HIF3AQ9Y2N7 669 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 CAB39Q9Y376 341 aaPredicted RBP7.52□□□□□ -1.21
CHD4-208ENST00000540960 NOX1Q9Y5S8 564 aa7.52□□□□□ -1.21
CHD4-208ENST00000540960 SNRNP200O75643 2136 aaKnown RBP7.51□□□□□ -1.21
CHD4-208ENST00000540960 IGHV1-45A0A0A0MS14 117 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 ANKRD33BA6NCL7 494 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 A6NIZ1 184 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 NPIPB13A6NJU9 1138 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 NPIPB4C9JG80 1138 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 KPNA4O00629 521 aaPredicted RBP7.51□□□□□ -1.21
CHD4-208ENST00000540960 XKRYO14609 159 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 CDC42EP2O14613 210 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 CLPXO76031 633 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 TXNDC12O95881 172 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 CH25HO95992 272 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 RENP00797 406 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 MT-ND5P03915 603 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 HSMCR30P0CW71 290 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 GAAP10253 952 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 C21orf33P30042 268 aaPredicted RBP7.51□□□□□ -1.21
CHD4-208ENST00000540960 MAP2K4P45985 399 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 TNFSF10P50591 281 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 RNF144AP50876 292 aaPredicted RBP7.51□□□□□ -1.21
CHD4-208ENST00000540960 SSR4P51571 173 aa7.51□□□□□ -1.21
CHD4-208ENST00000540960 RAP1BP61224 184 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms