RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ABCD4O14678 606 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 GMNNO75496 209 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 F13BP05160 661 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 SH3BGRP55822 239 aaPredicted RBP14.76□□□□□ -0.05
CD9-209ENST00000540891 TUBA1BP68363 451 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 TUBA4AP68366 448 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 PRKCDQ05655 676 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 FHL1Q13642 323 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 ZNF672Q499Z4 452 aaPredicted RBP14.76□□□□□ -0.05
CD9-209ENST00000540891 C1QTNF12Q5T7M4 302 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 ANKRD16Q6P6B7 361 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 TBPL2Q6SJ96 375 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 TUBA1AQ71U36 451 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 TMEM54Q969K7 222 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 BPIFA2Q96DR5 249 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 PYURFQ96I23 114 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 ADAD1Q96M93 576 aaKnown RBP14.76□□□□□ -0.05
CD9-209ENST00000540891 NSMCE2Q96MF7 247 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 PIP5K1AQ99755 562 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 OBP2BQ9NPH6 170 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 HIF3AQ9Y2N7 669 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 ROS1P08922 2347 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 CADP27708 2225 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 ARPC4-TTLL3A0A0A6YYG9 625 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 HTR3EA5X5Y0 456 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 ZNF503-AS2A6NEH8 195 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 ZNF99A8MXY4 864 aaPredicted RBP14.75□□□□□ -0.05
CD9-209ENST00000540891 SEC14L2O76054 403 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 DIRAS1O95057 198 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 RHCEP18577 417 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 PTAFRP25105 342 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 HOXC12P31275 282 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 RPS4XP62701 263 aaKnown RBP14.75□□□□□ -0.05
CD9-209ENST00000540891 RUNX1T1Q06455 604 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 LAPTM4AQ15012 233 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 KLHL17Q6TDP4 642 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 TMEM108Q6UXF1 575 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 MBOAT2Q6ZWT7 520 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 KRTAP1-3Q8IUG1 177 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 RNF113BQ8IZP6 322 aaKnown RBP14.75□□□□□ -0.05
CD9-209ENST00000540891 SLC7A13Q8TCU3 470 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 DHRS1Q96LJ7 313 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 CCL19Q99731 98 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 ANKRD19PQ9H560 264 aa14.75□□□□□ -0.05
CD9-209ENST00000540891 BEX4Q9NWD9 120 aaPredicted RBP14.75□□□□□ -0.05
CD9-209ENST00000540891 MAGED1Q9Y5V3 778 aaPredicted RBP14.75□□□□□ -0.05
CD9-209ENST00000540891 PRRC2AP48634 2157 aaKnown RBP14.75□□□□□ -0.05
CD9-209ENST00000540891 A0A1W2PRQ8 180 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 WNT11O96014 354 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 H1F0P07305 194 aaKnown RBP14.74□□□□□ -0.05
CD9-209ENST00000540891 DANCRP0C864 163 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 PGA4P0DJD7 388 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 PGA3P0DJD8 388 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 HOXB1P14653 301 aaPredicted RBP14.74□□□□□ -0.05
CD9-209ENST00000540891 ATP6V1B2P21281 511 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 CSNK1A1P48729 337 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 DGCR6Q14129 220 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 PODNL1Q6PEZ8 512 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 LRFN4Q6PJG9 635 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 KLHL24Q6TFL4 600 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 ZNF730Q6ZMV8 503 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 TRPM8Q7Z2W7 1104 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 CYP4Z1Q86W10 505 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
CD9-209ENST00000540891 LRRC75AQ8NAA5 344 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 OR6N1Q8NGY5 312 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 ASB10Q8WXI3 467 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 PIGTQ969N2 578 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 SLC25A44Q96H78 314 aaPredicted RBP14.74□□□□□ -0.05
CD9-209ENST00000540891 SEPHS2Q99611 448 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 FUZQ9BT04 418 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 ULBP2Q9BZM5 246 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 INIPQ9NRY2 104 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 TAS2R1Q9NYW7 299 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 GLTPQ9NZD2 209 aa14.74□□□□□ -0.05
CD9-209ENST00000540891 CRNNQ9UBG3 495 aaPredicted RBP14.74□□□□□ -0.05
CD9-209ENST00000540891 IGHV1-18A0A0C4DH31 117 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 CDC42EP2O14613 210 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 BCL10O95999 233 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 SOD3P08294 240 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 UBE2NP61088 152 aaKnown RBP14.73□□□□□ -0.05
CD9-209ENST00000540891 HIST3H3Q16695 136 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 PGGHGQ32M88 737 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 ARMC4Q5T2S8 1044 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 B3GLCTQ6Y288 498 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 ZNF627Q7L945 461 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 ARHGAP24Q8N264 748 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 FBXW5Q969U6 566 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 ZNF566Q969W8 418 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 RADILQ96JH8 1075 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 MRPL13Q9BYD1 178 aaKnown RBP14.73□□□□□ -0.05
CD9-209ENST00000540891 SEC61A2Q9H9S3 476 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 B3GAT2Q9NPZ5 323 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 ACTR3BQ9P1U1 418 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 MGAT4BQ9UQ53 548 aa14.73□□□□□ -0.05
CD9-209ENST00000540891 FAM32AQ9Y421 112 aaKnown RBP14.73□□□□□ -0.05
CD9-209ENST00000540891 DSCAMO60469 2012 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 TRAV27A0A087WT01 109 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 TRBV4-1A0A0J9YWV2 114 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 A0A1W2PRG6 482 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms