RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NKIRAS2Q9NYR9 191 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CHRNA9Q9UGM1 479 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 SLC23A1Q9UHI7 598 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 AUP1Q9Y679 476 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 NOTCH3Q9UM47 2321 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 WNK2Q9Y3S1 2297 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 COL7A1Q02388 2944 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 A8MT66 165 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 CLDN25C9JDP6 229 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 G3V4G9 280 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 RPL36A-HNRNPH2H7BZ11 118 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 TRAF3IP2O43734 574 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 SHOX2O60902 331 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 SKAP2O75563 359 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 FOXH1O75593 365 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 CLPXO76031 633 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 SEC14L2O76054 403 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 SCGB1D2O95969 90 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 CSTAP01040 98 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 HMGN2P05204 90 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 ENO1P06733 434 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 KRT16P08779 473 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF12P17014 697 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 HMOX2P30519 316 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 STX2P32856 288 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 ANP32AP39687 249 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 RAD52P43351 418 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 HTR3AP46098 478 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 HTR6P50406 440 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 SERPINB8P50452 374 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 MAP2K6P52564 334 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 KRTAP10-3P60369 221 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 RPS23P62266 143 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 LCN2P80188 198 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 DGCR2P98153 550 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 DR1Q01658 176 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 GUCY2DQ02846 1103 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 LASP1Q14847 261 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 MAD2L1BPQ15013 274 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF141Q15928 474 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 NRN1LQ496H8 165 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 DCST2Q5T1A1 773 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 AVPI1Q5T686 147 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 FAM219BQ5XKK7 198 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 NOXRED1Q6NXP6 359 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 GPRIN3Q6ZVF9 776 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 EIF3MQ7L2H7 374 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 SZRD1Q7Z422 152 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 GRINAQ7Z429 371 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF614Q8N883 585 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 IL17DQ8TAD2 202 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 MRAPQ8TCY5 172 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 ADAMTS15Q8TE58 950 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 DCAKDQ8WVC6 231 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 OIT3Q8WWZ8 545 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 TFAP2CQ92754 450 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 PMM1Q92871 262 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 RAB1CQ92928 201 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 RAB8BQ92930 207 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 CIDECQ96AQ7 238 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 DDIT4LQ96D03 193 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 TRIM44Q96DX7 344 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 FAM120BQ96EK7 910 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 OTUB1Q96FW1 271 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 CHMP6Q96FZ7 201 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 METTL2AQ96IZ6 378 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF385AQ96PM9 386 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 OSBPL9Q96SU4 736 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 MRPL57Q9BQC6 102 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 SLC30A2Q9BRI3 323 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 ACTRT3Q9BYD9 372 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 LINC00470Q9BZP3 86 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 OR11A1Q9GZK7 315 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 NMUR2Q9GZQ4 415 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 VPS11Q9H270 941 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 MRPL46Q9H2W6 279 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 PRDM13Q9H4Q3 707 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 CRLF2Q9HC73 371 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 TCF7L1Q9HCS4 588 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 HINT3Q9NQE9 182 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 TMEM140Q9NV12 185 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 C1RLQ9NZP8 487 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 LEF1Q9UJU2 399 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 PURGQ9UJV8 347 aaKnown RBP3.89□□□□□ -1.79
SNHG1-214ENST00000540865 PCDHGB4Q9UN71 923 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 STK38LQ9Y2H1 464 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 WIPI2Q9Y4P8 454 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 NOX1Q9Y5S8 564 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 DSPPQ9NZW4 1301 aa3.89□□□□□ -1.79
SNHG1-214ENST00000540865 PLECQ15149 4684 aaKnown RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 IGHV1-69-2A0A0G2JMI3 117 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 LOC100653049A0A140TA62 436 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 A0A1W2PPW3 197 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 AGAP5A6NIR3 686 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 AQP7P3A6NL99 342 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 C17orf100A8MU93 164 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 B5MCH6 92 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 TRIM49D1C9J1S8 452 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 NPIPB8E9PQR5 432 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 CCDC188H7C350 402 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms