RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 WASH6PQ9NQA3 447 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 DUSP22Q9NRW4 184 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 TCRBV5S1A1TA0A578 114 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 E9PI62 339 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 CSO75390 466 aaKnown RBP5.99□□□□□ -1.45
LSAMP-207ENST00000539563 OPN1LWP04000 364 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 CHRNB1P11230 501 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 ADPRHP54922 357 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 MC2RQ01718 297 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 SEMA3BQ13214 749 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 IKZF1Q13422 519 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 PRAMEF20Q5VT98 475 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 NKAIN2Q5VXU1 208 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 Q6ZSR9 355 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 ANKRD33Q7Z3H0 272 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 PELI3Q8N2H9 469 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 ESX1Q8N693 406 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 GHSRQ92847 366 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 PPA2Q9H2U2 334 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 CALHM2Q9HA72 323 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 PLXNB2O15031 1838 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 NKX6-3A6NJ46 265 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 OR2G6Q5TZ20 316 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 FAM71E1Q6IPT2 247 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 ZADH2Q8N4Q0 377 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 IP6K3Q96PC2 410 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 C20orf27Q9GZN8 174 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 CDCP1Q9H5V8 836 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 FGF21Q9NSA1 209 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 HCSTQ9UBK5 93 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 SLC23A2Q9UGH3 650 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 RCE1Q9Y256 329 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 ANKRD34BA5PLL1 514 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 TMEM200CA6NKL6 621 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 H0YIG0 161 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF749O43361 778 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 ABHD16AO95870 558 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 HEXAP06865 529 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 SRMP19623 302 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 BLVRBP30043 206 aaPredicted RBP5.99□□□□□ -1.45
LSAMP-207ENST00000539563 KIR2DL3P43628 341 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 CSNK1EP49674 416 aaKnown RBP5.99□□□□□ -1.45
LSAMP-207ENST00000539563 FOXK2Q01167 660 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 SPCS2Q15005 226 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 AADACL3Q5VUY0 350 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 SAXO2Q658L1 398 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 MFSD12Q6NUT3 480 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 RBMS3Q6XE24 437 aaKnown RBP5.99□□□□□ -1.45
LSAMP-207ENST00000539563 ENTHD1Q8IYW4 607 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 UTP4Q969X6 686 aaKnown RBP5.99□□□□□ -1.45
LSAMP-207ENST00000539563 LIN37Q96GY3 246 aaPredicted RBP5.99□□□□□ -1.45
LSAMP-207ENST00000539563 QRSL1Q9H0R6 528 aaKnown RBP5.99□□□□□ -1.45
LSAMP-207ENST00000539563 UGT2A1Q9Y4X1 527 aa5.99□□□□□ -1.45
LSAMP-207ENST00000539563 ALOX12BO75342 701 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 RGS11O94810 467 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 BCKDHBP21953 392 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 BCL6P41182 706 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 Q499Y3 187 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 SFXN4Q6P4A7 337 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 TMEM71Q6P5X7 295 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 SLC22A25Q6T423 547 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 RFLNAQ6ZTI6 216 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.98□□□□□ -1.45
LSAMP-207ENST00000539563 GAREM1Q9H706 876 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 GPATCH2Q9NW75 528 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 CD300AQ9UGN4 299 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 TRDV1A0A1B0GX56 115 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 PLPP1O14494 284 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF254O75437 659 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 GPX2P18283 190 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 CYB561P49447 251 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 LIM2P55344 173 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 COL9A2Q14055 689 aaPredicted RBP5.98□□□□□ -1.45
LSAMP-207ENST00000539563 H1FNTQ75WM6 255 aaPredicted RBP5.98□□□□□ -1.45
LSAMP-207ENST00000539563 DNAJC5GQ8N7S2 189 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 LMNTD1Q8N9Z9 388 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 NECAP2Q9NVZ3 263 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 ANKRD31Q8N7Z5 1873 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 LRRC30A6NM36 301 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 UBL3O95164 117 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 EIF4EP06730 217 aaKnown RBP5.98□□□□□ -1.45
LSAMP-207ENST00000539563 GLULP15104 373 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF93P35789 620 aaPredicted RBP5.98□□□□□ -1.45
LSAMP-207ENST00000539563 KDM4DQ6B0I6 523 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF836Q6ZNA1 936 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 OR4A16Q8NH70 328 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 SMIM14Q96QK8 99 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 ARPC5LQ9BPX5 153 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 SLC25A21Q9BQT8 299 aaPredicted RBP5.98□□□□□ -1.45
LSAMP-207ENST00000539563 TCEAL7Q9BRU2 100 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 AMBRA1Q9C0C7 1298 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 CHST8Q9H2A9 424 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 SERTAD4Q9NUC0 356 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 PLEKHM1Q9Y4G2 1056 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 SNX11Q9Y5W9 270 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 SLC5A10A0PJK1 596 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 BET1O15155 118 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 MTHFD2P13995 350 aa5.98□□□□□ -1.45
LSAMP-207ENST00000539563 EN2P19622 333 aaPredicted RBP5.98□□□□□ -1.45
LSAMP-207ENST00000539563 HOXA1P49639 335 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms