RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 TMEM272A0A1B0GTI8 110 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 A8MXK9 166 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 H3BUI4 141 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 TOR1AO14656 332 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 F13BP05160 661 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 ADPRHP54922 357 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 C11orf88Q6PI97 169 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 C17orf107Q6ZR85 190 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 ZNF454Q8N9F8 522 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 OR5AK2Q8NH90 309 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 ADAD1Q96M93 576 aaKnown RBP18.48■□□□□ 0.55
TMEM260-203ENST00000539559 CMTM3Q96MX0 182 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 FOXN4Q96NZ1 517 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 OR2M4Q96R27 311 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 AIFM2Q9BRQ8 373 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 TRIM2Q9C040 744 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 RXFP3Q9NSD7 469 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 LRIT1Q9P2V4 623 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 OR10H2O60403 315 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 GLSO94925 669 aaPredicted RBP18.48■□□□□ 0.55
TMEM260-203ENST00000539559 APOC3P02656 99 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 DLX5P56178 289 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 MAT1AQ00266 395 aaKnown RBP18.48■□□□□ 0.55
TMEM260-203ENST00000539559 DEFB110Q30KQ9 67 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 ZNF660Q6AZW8 331 aaPredicted RBP18.48■□□□□ 0.55
TMEM260-203ENST00000539559 ULK3Q6PHR2 472 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 ZNF761Q86XN6 746 aaPredicted RBP18.48■□□□□ 0.55
TMEM260-203ENST00000539559 DOCK8Q8NF50 2099 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 MYO9BQ13459 2157 aa18.48■□□□□ 0.55
TMEM260-203ENST00000539559 A0A087WV62 115 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 TUBAL3A6NHL2 446 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 OR6C65A6NJZ3 312 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 CTNSO60931 367 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 RDH16O75452 317 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 B3GALNT1O75752 331 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 RBBP9O75884 186 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 ANXA2P07355 339 aaKnown RBP18.47■□□□□ 0.55
TMEM260-203ENST00000539559 PPP1CAP62136 330 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 RPS21P63220 83 aaKnown RBP18.47■□□□□ 0.55
TMEM260-203ENST00000539559 BAMBIQ13145 260 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 GAS6Q14393 721 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 Q499Y3 187 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 LINC00114Q6XXX2 140 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 ABHD13Q7L211 337 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 LRRTM1Q86UE6 522 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 BVESQ8NE79 360 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 OR2AK2Q8NG84 335 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 TNFAIP8L1Q8WVP5 186 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 ANKRD9Q96BM1 317 aaPredicted RBP18.47■□□□□ 0.55
TMEM260-203ENST00000539559 RPP25Q9BUL9 199 aaKnown RBP18.47■□□□□ 0.55
TMEM260-203ENST00000539559 ZNF230Q9UIE0 474 aaPredicted RBP18.47■□□□□ 0.55
TMEM260-203ENST00000539559 UBE2QL1A1L167 161 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 SNRPGP15A8MWD9 76 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 F5H5P2 479 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 GMFGO60234 142 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 UPK3AO75631 287 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 IL5P05113 134 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 RAB40ALP0C0E4 278 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 FNTBP49356 437 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 GK2Q14410 553 aaPredicted RBP18.47■□□□□ 0.55
TMEM260-203ENST00000539559 OVCH2Q7RTZ1 564 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 BOLLQ8N9W6 283 aaKnown RBP18.47■□□□□ 0.55
TMEM260-203ENST00000539559 OR4C3Q8NH37 302 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 RAB40AQ8WXH6 277 aa18.47■□□□□ 0.55
TMEM260-203ENST00000539559 SULT1B1O43704 296 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 NKX2-2O95096 273 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 PLATP00750 562 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 PPP3CBP16298 524 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 RBM34P42696 430 aaKnown RBP18.46■□□□□ 0.55
TMEM260-203ENST00000539559 ILF3Q12906 894 aaKnown RBP eCLIP18.46■□□□□ 0.55
TMEM260-203ENST00000539559 IL10RAQ13651 578 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 ERV3-1Q14264 604 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 ZNF684Q5T5D7 378 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 LRFN4Q6PJG9 635 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 DPY19L2P2Q6ZN68 376 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.46■□□□□ 0.55
TMEM260-203ENST00000539559 TMPRSS13Q9BYE2 586 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 GLCEO94923 617 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 IFNA16P05015 189 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 GTF2F2P13984 249 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 ALKBH1Q13686 389 aaKnown RBP18.46■□□□□ 0.55
TMEM260-203ENST00000539559 ENPP2Q13822 863 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 C4orf46Q504U0 113 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 LRRC69Q6ZNQ3 347 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 DUSP19Q8WTR2 217 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 TMEM106AQ96A25 262 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 NMNAT2Q9BZQ4 307 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 SLITRK2Q9H156 845 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 ACTR10Q9NZ32 417 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 CLEC1BQ9P126 229 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 F5P12259 2224 aa18.46■□□□□ 0.55
TMEM260-203ENST00000539559 TRAV18A0A075B6X5 111 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 PCP4L1A6NKN8 68 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 FGF2P09038 288 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 CALCBP10092 127 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 C5AR1P21730 350 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 ACHEP22303 614 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 GPR18Q14330 331 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 RBMS2Q15434 407 aaKnown RBP18.46■□□□□ 0.54
TMEM260-203ENST00000539559 TMEM31Q5JXX7 168 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms