RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 COL4A2P08572 1712 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 NPIPB9F8W1W9 429 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 H7C1C5 153 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 AK1P00568 194 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 TNFP01375 233 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 CT45A8P0DMV1 189 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 CT45A9P0DMV2 189 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 AKT2P31751 481 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 LCN6P62502 163 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 CT45A2Q5DJT8 189 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 SLC22A10Q63ZE4 541 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 TMUB2Q71RG4 321 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 FCAMRQ8WWV6 532 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 RASD2Q96D21 266 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 CCDC3Q9BQI4 270 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 INPP5EQ9NRR6 644 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 ICAM5Q9UMF0 924 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 KRT33AO76009 404 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 FZD2Q14332 565 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 MANEAQ5SRI9 462 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 TAF8Q7Z7C8 310 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 TMED4Q7Z7H5 227 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 OR10AC1Q8NH08 325 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 KLHDC3Q9BQ90 382 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 PFDN2Q9UHV9 154 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 MRTO4Q9UKD2 239 aaKnown RBP11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 GTF2A1LQ9UNN4 478 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 OR10H1Q9Y4A9 318 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 TMEM184BQ9Y519 407 aaPredicted RBP11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 PCDHGA9Q9Y5G4 932 aaKnown RBP11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 CREBL2O60519 120 aaPredicted RBP11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 SEMA4FO95754 770 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 OR8G3PP0DMU2 310 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 MAOAP21397 527 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 ITPKBP27987 946 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 PTH2RP49190 550 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 PGDP52209 483 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 HHEXQ03014 270 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 B3GNTL1Q67FW5 361 aaPredicted RBP11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 TPRA1Q86W33 373 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 FAM219AQ8IW50 185 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 GATSQ8NAP1 163 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 ZSCAN1Q8NBB4 408 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 HAVCR2Q8TDQ0 301 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 HSPA12BQ96MM6 686 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 SPOCK3Q9BQ16 436 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 POLE3Q9NRF9 147 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 C14orf105Q9NVL8 296 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 SESN1Q9Y6P5 492 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 TVP23AA6NH52 213 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 P2RX1P51575 399 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 ERVK-25P63136 954 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 CDK5R1Q15078 307 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 PCGF3Q3KNV8 242 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 LIN54Q6MZP7 749 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 TMPRSS12Q86WS5 348 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 METTL27Q8N6F8 245 aaPredicted RBP11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 TNFAIP8L1Q8WVP5 186 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 Q96M85 177 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 SHARPINQ9H0F6 387 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 IFT46Q9NQC8 304 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 KLHL9Q9P2J3 617 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 OR5V1Q9UGF6 321 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 HS3ST3A1Q9Y663 406 aa11.44□□□□□ -0.58
SFSWAP-208ENST00000539506 OR6C68A6NDL8 312 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 ZP3P21754 424 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 IL32P24001 234 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 SLC6A6P31641 620 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 S100A11P31949 105 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 CBFBQ13951 182 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 C4orf46Q504U0 113 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 METTL11BQ5VVY1 283 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 MCATQ8IVS2 390 aaKnown RBP11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 OR51A4Q8NGJ6 313 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 DUSP19Q8WTR2 217 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 RNF166Q96A37 237 aaPredicted RBP11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 MARVELD3Q96A59 401 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 SEC22AQ96IW7 307 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 SRA1Q9HD15 236 aaKnown RBP11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 NPDC1Q9NQX5 325 aaPredicted RBP11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 CD207Q9UJ71 328 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 EML5Q05BV3 1969 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 SPTY2D1-AS1A0A0U1RR47 76 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 CCSO14618 274 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 RP2O75695 350 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 ZFPL1O95159 310 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 CD53P19397 219 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 RBM34P42696 430 aaKnown RBP11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 GPR3P46089 330 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 EFNB2P52799 333 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 SEC61A1P61619 476 aaKnown RBP11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 ZNF141Q15928 474 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 PRTGQ2VWP7 1150 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 GLDNQ6ZMI3 551 aaPredicted RBP11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 NPEPL1Q8NDH3 523 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 C16orf52Q8NHV5 167 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 THEM6Q8WUY1 208 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 TRIM2Q9C040 744 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 SEMA6CQ9H3T2 930 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 COPZ2Q9P299 210 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms