RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZBTB37Q5TC79 503 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 LEG1Q6P5S2 330 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 SLC16A9Q7RTY1 509 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 PRSS45Q7RTY3 260 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 BMPERQ8N8U9 685 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 EXD3Q8N9H8 876 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 ELOA3Q8NG57 546 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 ANGPTL6Q8NI99 470 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 ZDHHC1Q8WTX9 485 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 TCTN2Q96GX1 697 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 DERL3Q96Q80 235 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 PELOQ9BRX2 385 aaKnown RBP13.23□□□□□ -0.29
CDCA3-207ENST00000538862 GPR27Q9NS67 375 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 ANKRD10Q9NXR5 420 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 V9GY05 133 aa13.23□□□□□ -0.29
CDCA3-207ENST00000538862 GPR171O14626 319 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 PRAF2O60831 178 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 CDC123O75794 336 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-207ENST00000538862 ZFPL1O95159 310 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 MT-ND4P03905 459 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 CALCBP10092 127 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 CXCL3P19876 107 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 CDKN2AP42771 156 aaKnown RBP13.22□□□□□ -0.29
CDCA3-207ENST00000538862 BLKP51451 505 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 PER3P56645 1201 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 AP3S2P59780 193 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 MRPS10P82664 201 aaKnown RBP13.22□□□□□ -0.29
CDCA3-207ENST00000538862 MAT1AQ00266 395 aaKnown RBP13.22□□□□□ -0.29
CDCA3-207ENST00000538862 IKZF1Q13422 519 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 ZNF74Q16587 644 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 FAM122BQ7Z309 247 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 ATG4DQ86TL0 474 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-207ENST00000538862 JAZF1Q86VZ6 243 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 LRRC75AQ8NAA5 344 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 MOSPD2Q8NHP6 518 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 SUN5Q8TC36 379 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 RNF166Q96A37 237 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-207ENST00000538862 UBQLN4Q9NRR5 601 aa13.22□□□□□ -0.29
CDCA3-207ENST00000538862 ELF5Q9UKW6 265 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-207ENST00000538862 ZNF593O00488 134 aaPredicted RBP13.21□□□□□ -0.29
CDCA3-207ENST00000538862 CER1O95813 267 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 TXNDC12O95881 172 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 RAB40ALP0C0E4 278 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 THEGLP0DJG4 465 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 MAPK3P27361 379 aaPredicted RBP13.21□□□□□ -0.29
CDCA3-207ENST00000538862 OR3A3P47888 321 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 CCR9P51686 369 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 PGDP52209 483 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 NANOS3P60323 173 aaKnown RBP13.21□□□□□ -0.29
CDCA3-207ENST00000538862 RIPPLY1Q0D2K3 151 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 ERV3-1Q14264 604 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 NNATQ16517 81 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 GXYLT1Q4G148 440 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 ELFN2Q5R3F8 820 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 HES5Q5TA89 166 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 FNDC7Q5VTL7 733 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 LYPD8Q6UX82 237 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 LINGO2Q7L985 606 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 NUP54Q7Z3B4 507 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 C15orf40Q8WUR7 153 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 RAB40AQ8WXH6 277 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 S100A16Q96FQ6 103 aaKnown RBP13.21□□□□□ -0.29
CDCA3-207ENST00000538862 Q96M85 177 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 ZNF285Q96NJ3 590 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 SMAD5Q99717 465 aaKnown RBP13.21□□□□□ -0.29
CDCA3-207ENST00000538862 C20orf85Q9H1P6 137 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 AUNIPQ9H7T9 357 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 EXOSC3Q9NQT5 275 aaKnown RBP13.21□□□□□ -0.29
CDCA3-207ENST00000538862 NANSQ9NR45 359 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 KLHL9Q9P2J3 617 aa13.21□□□□□ -0.29
CDCA3-207ENST00000538862 ACOD1A6NK06 481 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 BLOC1S5-TXNDC5H3BN57 136 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 NOS1APO75052 506 aaPredicted RBP13.21□□□□□ -0.3
CDCA3-207ENST00000538862 PEX14O75381 377 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 TGM6O95932 706 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 TPOP07202 933 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 ADRB1P08588 477 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 MAOAP21397 527 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 PRKACBP22694 351 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 SDHAP31040 664 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 AQP2P41181 271 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 MNDAP41218 407 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 C1orf61Q13536 156 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 CAMK2DQ13557 499 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 SERTAD2Q14140 314 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 COL28A1Q2UY09 1125 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 Q499Y3 187 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 EMC4Q5J8M3 183 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 FCRLAQ7L513 359 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 FAM220AQ7Z4H9 259 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 IZUMO1Q8IYV9 350 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 OR8H1Q8NGG4 311 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 RGP1Q92546 391 aaPredicted RBP13.21□□□□□ -0.3
CDCA3-207ENST00000538862 SLC25A38Q96DW6 304 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 MAP6Q96JE9 813 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 RADILQ96JH8 1075 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 MNTQ99583 582 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 SLITRK2Q9H156 845 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 HRASLSQ9HDD0 168 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 SCP2D1Q9UJQ7 156 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms