RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SLC23A3Q6PIS1 610 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 LYPD4Q6UWN0 246 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 PLXDC1Q8IUK5 500 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 Q8N9G6 341 aaPredicted RBP8.38□□□□□ -1.07
DDB1-211ENST00000538280 PLPP5Q8NEB5 264 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 OR1N1Q8NGS0 311 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 DAZLQ92904 295 aaKnown RBP8.38□□□□□ -1.07
DDB1-211ENST00000538280 YIPF5Q969M3 257 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 KTI12Q96EK9 354 aaPredicted RBP8.38□□□□□ -1.07
DDB1-211ENST00000538280 MAP6Q96JE9 813 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 ABHD1Q96SE0 405 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 C7orf50Q9BRJ6 194 aaKnown RBP8.38□□□□□ -1.07
DDB1-211ENST00000538280 THAP7Q9BT49 309 aaPredicted RBP8.38□□□□□ -1.07
DDB1-211ENST00000538280 TTTY10Q9BZA0 68 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 OR8D2Q9GZM6 311 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 WWTR1Q9GZV5 400 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 ZNF768Q9H5H4 540 aaKnown RBP8.38□□□□□ -1.07
DDB1-211ENST00000538280 CCDC86Q9H6F5 360 aaKnown RBP8.38□□□□□ -1.07
DDB1-211ENST00000538280 PLEKHA1Q9HB21 404 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 ZNF304Q9HCX3 659 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 WDR70Q9NW82 654 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 NLKQ9UBE8 527 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 DHCR7Q9UBM7 475 aaKnown RBP8.38□□□□□ -1.07
DDB1-211ENST00000538280 GNG8Q9UK08 70 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 CAMK2AQ9UQM7 478 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 KLHDC2Q9Y2U9 406 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 ZNF281Q9Y2X9 895 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 CLCA3PQ9Y6N3 262 aa8.38□□□□□ -1.07
DDB1-211ENST00000538280 SETXQ7Z333 2677 aaKnown RBP8.38□□□□□ -1.07
DDB1-211ENST00000538280 IGLV3-12A0A075B6K2 115 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 TRAV36DV7A0A075B6V5 113 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 ARPC4-TTLL3A0A0A6YYG9 625 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 CENPXA8MT69 81 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 INMT-MINDY4F8WBC2 141 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 PDCD5O14737 125 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 ORC5O43913 435 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 FADS1O60427 444 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 SDC3O75056 442 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 MT-ATP6P00846 226 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 YES1P07947 543 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 PSKH1P11801 424 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 SNRPBP14678 240 aaKnown RBP8.37□□□□□ -1.07
DDB1-211ENST00000538280 FOLR1P15328 257 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 HPGDP15428 266 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 ARSBP15848 533 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 GLB1P16278 677 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 PGCP20142 388 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 MNDAP41218 407 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 INPP1P49441 399 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 RRAS2P62070 204 aaPredicted RBP8.37□□□□□ -1.07
DDB1-211ENST00000538280 PITPNAQ00169 270 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 ALKBH1Q13686 389 aaKnown RBP8.37□□□□□ -1.07
DDB1-211ENST00000538280 CDK10Q15131 360 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 HSD17B12Q53GQ0 312 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 ZNF57Q68EA5 555 aaPredicted RBP8.37□□□□□ -1.07
DDB1-211ENST00000538280 FDX2Q6P4F2 183 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 WDR74Q6RFH5 385 aaPredicted RBP8.37□□□□□ -1.07
DDB1-211ENST00000538280 COX15Q7KZN9 410 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 NANOGNBQ7Z5D8 188 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 NOXA1Q86UR1 476 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 UBE2J2Q8N2K1 259 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 OR4D9Q8NGE8 314 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 OR2T4Q8NH00 348 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 OR6S1Q8NH40 331 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 ZNF519Q8TB69 540 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 RNF138Q8WVD3 245 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 CAPSLQ8WWF8 208 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 ADAMTS14Q8WXS8 1223 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 TAAR8Q969N4 342 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 ZNF501Q96CX3 271 aaPredicted RBP8.37□□□□□ -1.07
DDB1-211ENST00000538280 OMA1Q96E52 524 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 DERL3Q96Q80 235 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 OR14A2Q96R54 314 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 ADOQ96SZ5 270 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 PDCD1LG2Q9BQ51 273 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 MRI1Q9BV20 369 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 PTDSS2Q9BVG9 487 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 TGIF2Q9GZN2 237 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 NIPAL2Q9H841 368 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 RANGRFQ9HD47 186 aaPredicted RBP8.37□□□□□ -1.07
DDB1-211ENST00000538280 NOX4Q9NPH5 578 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 RPRD1BQ9NQG5 326 aaKnown RBP8.37□□□□□ -1.07
DDB1-211ENST00000538280 ZNF275Q9NSD4 429 aaPredicted RBP8.37□□□□□ -1.07
DDB1-211ENST00000538280 MRM2Q9UI43 246 aaKnown RBP8.37□□□□□ -1.07
DDB1-211ENST00000538280 CACNG2Q9Y698 323 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 APC2O95996 2303 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 EXPH5Q8NEV8 1989 aa8.37□□□□□ -1.07
DDB1-211ENST00000538280 TRBV5-7A0A0A0MS05 114 aa8.36□□□□□ -1.07
DDB1-211ENST00000538280 A0A1B0GX78 115 aa8.36□□□□□ -1.07
DDB1-211ENST00000538280 A8MV72 311 aaPredicted RBP8.36□□□□□ -1.07
DDB1-211ENST00000538280 IDSB3KWA1 339 aa8.36□□□□□ -1.07
DDB1-211ENST00000538280 BLOC1S5-TXNDC5H3BN57 136 aa8.36□□□□□ -1.07
DDB1-211ENST00000538280 AIPO00170 330 aa8.36□□□□□ -1.07
DDB1-211ENST00000538280 DCTN6O00399 190 aa8.36□□□□□ -1.07
DDB1-211ENST00000538280 PHYHO14832 338 aa8.36□□□□□ -1.07
DDB1-211ENST00000538280 TOX3O15405 576 aaPredicted RBP8.36□□□□□ -1.07
DDB1-211ENST00000538280 CPNE3O75131 537 aaKnown RBP8.36□□□□□ -1.07
DDB1-211ENST00000538280 ITGA10O75578 1167 aa8.36□□□□□ -1.07
DDB1-211ENST00000538280 TPPPO94811 219 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms