RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 PCNPQ8WW12 178 aaKnown RBP9.75□□□□□ -0.85
CLIP1-210ENST00000538120 PHF21AQ96BD5 680 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 RADILQ96JH8 1075 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ZC3H10Q96K80 434 aaKnown RBP9.75□□□□□ -0.85
CLIP1-210ENST00000538120 NARFLQ9H6Q4 476 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ADGRL4Q9HBW9 690 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 APMAPQ9HDC9 416 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 COPS7AQ9UBW8 275 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF337Q9Y3M9 751 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ADAM18Q9Y3Q7 739 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 SIRT4Q9Y6E7 314 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-210ENST00000538120 HEATR5AQ86XA9 2040 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 A0A1W2PQD3 144 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 SLC22A31A6NKX4 558 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ELOA3DA6NLF2 546 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-210ENST00000538120 IMPA2O14732 288 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 IGF2P01344 180 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 HLA-DPB1P04440 258 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 GYPBP06028 91 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 PNMTP11086 282 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF3P17036 446 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 IL12BP29460 328 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 PNLIPRP2P54317 469 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 TOMM34Q15785 309 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF74Q16587 644 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ELOA3BQ3SY89 546 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 METAP1DQ6UB28 335 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-210ENST00000538120 DPY19L2P2Q6ZN68 376 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 C16orf47Q6ZP98 133 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF767PQ75MW2 155 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 LRRC75AQ8NAA5 344 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 APCDD1LQ8NCL9 501 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 SDR9C7Q8NEX9 313 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ELOA3Q8NG57 546 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 OR4K13Q8NH42 304 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 MOSPD2Q8NHP6 518 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 IFI44Q8TCB0 444 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ZNRF4Q8WWF5 429 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 LIPHQ8WWY8 451 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 TBX5Q99593 518 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 SEMA4CQ9C0C4 833 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 SYNDIG1Q9H7V2 258 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 NRIP3Q9NQ35 241 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 OCIAD1Q9NX40 245 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 HAO2Q9NYQ3 351 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 RARRES3Q9UL19 164 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 VSTM2BA6NLU5 285 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 IDSB3KWA1 339 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 YKT6O15498 198 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 FADS1O60427 444 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF354AO60765 605 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-210ENST00000538120 EIF4EP06730 217 aaKnown RBP9.74□□□□□ -0.85
CLIP1-210ENST00000538120 MRPL3P09001 348 aaKnown RBP9.74□□□□□ -0.85
CLIP1-210ENST00000538120 SBK2P0C263 348 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 PAICSP22234 425 aaKnown RBP9.74□□□□□ -0.85
CLIP1-210ENST00000538120 SLC6A1P30531 599 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 HAAOP46952 286 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 OR10A3P58181 314 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 RNF4P78317 190 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF85Q03923 595 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 TOR2AQ5JU69 321 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 OVCH1Q7RTY7 1134 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 C17orf47Q8NEP4 570 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 OR11H7Q8NGC8 314 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 OR11H4Q8NGC9 324 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 HSD17B8Q92506 261 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 NAT6Q93015 286 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 ALG8Q9BVK2 526 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 ARPC3O15145 178 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 GMFGO60234 142 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 IFNGP01579 166 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 HEXBP07686 556 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 TACR3P29371 465 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 BTCP35070 178 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 BLVRAP53004 296 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 RPS7P62081 194 aaKnown RBP9.74□□□□□ -0.85
CLIP1-210ENST00000538120 DCDP81605 110 aaKnown RBP9.74□□□□□ -0.85
CLIP1-210ENST00000538120 RIN1Q13671 783 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 ESCO2Q56NI9 601 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 RNASE12Q5GAN4 147 aaKnown RBP9.74□□□□□ -0.85
CLIP1-210ENST00000538120 ZBTB37Q5TC79 503 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 NPEPL1Q8NDH3 523 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 OR10H4Q8NGA5 316 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 ZPLD1Q8TCW7 415 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 SMPDL3BQ92485 455 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 CREB3L1Q96BA8 519 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 KTI12Q96EK9 354 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-210ENST00000538120 GPX7Q96SL4 187 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-210ENST00000538120 WDR77Q9BQA1 342 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-210ENST00000538120 ABCG5Q9H222 651 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 MMP25Q9NPA2 562 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 ZFP64Q9NPA5 681 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 BABAM2Q9NXR7 383 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 COQ3Q9NZJ6 369 aa9.74□□□□□ -0.85
CLIP1-210ENST00000538120 DAPL1A0PJW8 107 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 C4orf47A7E2U8 309 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 HCRTR2O43614 444 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 EIF4E2O60573 245 aaKnown RBP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 ALOX12BO75342 701 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 CXCL3P19876 107 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms