RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 FAM107AO95990 144 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 IFNA14P01570 189 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 IGLV1-44P01699 117 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 F13BP05160 661 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 CD3EP07766 207 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 ADORA3P0DMS8 318 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 THRBP10828 461 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 HSD17B1P14061 328 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 NQO1P15559 274 aaKnown RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 TCN1P20061 433 aaPredicted RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 AHCYP23526 432 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 RBM34P42696 430 aaKnown RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 BIDP55957 195 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 RPS4XP62701 263 aaKnown RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 VLDLRP98155 873 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 RPL18Q07020 188 aaKnown RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 C1DQ13901 141 aaKnown RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 MELKQ14680 651 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 SEC23BQ15437 767 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 HIST3H3Q16695 136 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 MST1LQ2TV78 715 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 IFI44LQ53G44 452 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 ARMC4Q5T2S8 1044 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 C11orf71Q6IPW1 123 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 C20orf204Q6ZNR8 217 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 RINLQ6ZS11 566 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 SLC35D2Q76EJ3 337 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 ZNF627Q7L945 461 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 TGIF2LYQ8IUE0 185 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 OFCC1Q8IZS5 231 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 PGAM4Q8N0Y7 254 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 CIARTQ8N365 385 aaPredicted RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 C17orf78Q8N4C9 275 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 PIK3C3Q8NEB9 887 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 ANKK1Q8NFD2 765 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 OR6X1Q8NH79 312 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 MAGEE2Q8TD90 523 aaPredicted RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 SMAP2Q8WU79 429 aaPredicted RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 HTRA1Q92743 480 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 MUCL1Q96DR8 90 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 LRR1Q96L50 414 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 DHRS1Q96LJ7 313 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 GPA33Q99795 319 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 MRPL13Q9BYD1 178 aaKnown RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 ESRP2Q9H6T0 727 aaKnown RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 NMNAT1Q9HAN9 279 aaPredicted RBP7.32□□□□□ -1.24
SPARC-208ENST00000538026 SPAG4Q9NPE6 437 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 ADA2Q9NZK5 511 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 ADAM21Q9UKJ8 722 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 NOX1Q9Y5S8 564 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 ENPP4Q9Y6X5 453 aa7.32□□□□□ -1.24
SPARC-208ENST00000538026 ARPC4-TTLL3A0A0A6YYG9 625 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 TRBV4-1A0A0J9YWV2 114 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 OR6C65A6NJZ3 312 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 BLOC1S5-TXNDC5H3BN57 136 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 M0R1B8 84 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 GSTA4O15217 222 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 IGKV3-15P01624 115 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 IFNW1P05000 195 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 PATE4P0C8F1 98 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 PGA4P0DJD7 388 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 PGA3P0DJD8 388 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 PTAFRP25105 342 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 GTF2E2P29084 291 aaKnown RBP7.31□□□□□ -1.24
SPARC-208ENST00000538026 CALCRP30988 508 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 PTH2RP49190 550 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 ZNF133P52736 654 aaPredicted RBP7.31□□□□□ -1.24
SPARC-208ENST00000538026 FXYD6P3P58550 94 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 PRPS1P60891 318 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 NKX6-1P78426 367 aaPredicted RBP7.31□□□□□ -1.24
SPARC-208ENST00000538026 MS4A2Q01362 244 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 HGFACQ04756 655 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 PRKCDQ05655 676 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 MSMPQ1L6U9 139 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 HMBOX1Q6NT76 420 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 ANKRD16Q6P6B7 361 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 PODNL1Q6PEZ8 512 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 DTX2Q86UW9 622 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 NRMQ8IXM6 262 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 DEFB107AQ8IZN7 70 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 CLDN22Q8N7P3 220 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 SLC7A13Q8TCU3 470 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 GEMIN6Q8WXD5 167 aaKnown RBP7.31□□□□□ -1.24
SPARC-208ENST00000538026 ASB10Q8WXI3 467 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 HDAC2Q92769 488 aaKnown RBP7.31□□□□□ -1.24
SPARC-208ENST00000538026 FAM162AQ96A26 154 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 SGTBQ96EQ0 304 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 PERPQ96FX8 193 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 TNFRSF13CQ96RJ3 184 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 ZNF347Q96SE7 839 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 CCL19Q99731 98 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 TRAF4Q9BUZ4 470 aaPredicted RBP7.31□□□□□ -1.24
SPARC-208ENST00000538026 GSX2Q9BZM3 304 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 CISD1Q9NZ45 108 aaKnown RBP7.31□□□□□ -1.24
SPARC-208ENST00000538026 GLTPQ9NZD2 209 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 LAMP3Q9UQV4 416 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 HIF3AQ9Y2N7 669 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 AMDHD2Q9Y303 409 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 UGT2A1Q9Y4X1 527 aa7.31□□□□□ -1.24
SPARC-208ENST00000538026 TRAV27A0A087WT01 109 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms