RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 GGTA1PQ4G0N0 100 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 COX20Q5RI15 118 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 CD300LDQ6UXZ3 194 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 PRR18Q8N4B5 295 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 OR51G2Q8NGK0 314 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 OR2A12Q8NGT7 310 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 OR2L8Q8NGY9 312 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 TFGQ92734 400 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF607Q96SK3 696 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 POMT1Q9Y6A1 747 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 C7orf77A4D0Y5 90 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ANKRD61A6NGH8 418 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 SULT2B1O00204 365 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 MMP2P08253 660 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 RPS2P15880 293 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ATF1P18846 271 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 SERPINF1P36955 418 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 GAS1P54826 345 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 SEMG2Q02383 582 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 SERINC3Q13530 473 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 AWAT1Q58HT5 328 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF529Q6P280 563 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 TMEM25Q86YD3 366 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 SLC35F3Q8IY50 421 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 PRSS35Q8N3Z0 413 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF485Q8NCK3 441 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 OR4E2Q8NGC2 313 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 TEAD3Q99594 435 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 DUSP15Q9H1R2 295 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 APMAPQ9HDC9 416 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 KLK11Q9UBX7 282 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ZDHHC8Q9ULC8 765 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 NUP205Q92621 2012 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 SLC25A14O95258 325 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 CD34P28906 385 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 CACNG1Q06432 222 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 VWA2Q5GFL6 755 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 FAM27D1Q5T7N8 215 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 NKAIN2Q5VXU1 208 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 NPSR1Q6W5P4 371 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 GID4Q8IVV7 300 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF610Q8N9Z0 462 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 OR51S1Q8NGJ8 323 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 OR4A4PQ8NGN8 299 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 OR5R1Q8NH85 324 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 BBS10Q8TAM1 723 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 OR2M4Q96R27 311 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ATG101Q9BSB4 218 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 COL25A1Q9BXS0 654 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 SYT4Q9H2B2 425 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 LHX9Q9NQ69 397 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 EXOGQ9Y2C4 368 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 NOP16Q9Y3C1 178 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 A0A0A6YYC8 382 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 TRAV1-2A0A0B4J238 106 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 TMEM210A6NLX4 147 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 IQCF5A8MTL0 148 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 I3L1I5 382 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 MOSPD3O75425 235 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ACP5P13686 325 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 NME2P22392 152 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 DCTDP32321 178 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 CD80P33681 288 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 MAP3K8P41279 467 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 LIM2P55344 173 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 RAP1AP62834 184 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 PSAPL1Q6NUJ1 521 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 UMODL1-AS1Q8N2C9 162 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 OR10H4Q8NGA5 316 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 CYB5D2Q8WUJ1 264 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 SAT2Q96F10 170 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ZPBPQ9BS86 351 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 VN1R3Q9BXE9 311 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 POT1Q9NUX5 634 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 TOX3O15405 576 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 PRAMEF11O60813 436 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 IGHA1P01876 353 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 ITGA5P08648 1049 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 RAB40ALP0C0E4 278 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 HTR1FP30939 366 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 CEACAM6P40199 344 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 RPIAP49247 311 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 LSM6P62312 80 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 RPE65Q16518 533 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 C2orf68Q2NKX9 166 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 PCGF3Q3KNV8 242 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 C14orf28Q4W4Y0 310 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 LRRC73Q5JTD7 316 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 CLEC12AQ5QGZ9 265 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 PODNL1Q6PEZ8 512 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 GPR137CQ8N3F9 429 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 DCAF4L2Q8NA75 395 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 TEX19Q8NA77 164 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 TMED6Q8WW62 240 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 LCN9Q8WX39 176 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 RAB40AQ8WXH6 277 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 KIRREL1Q96J84 757 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 TBX5Q99593 518 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 GPR174Q9BXC1 333 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 BHLHE41Q9C0J9 482 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms