RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 WDR88Q6ZMY6 472 aa15.66■□□□□ 0.1
TNFRSF1A-209ENST00000536717 NKAIN4Q8IVV8 208 aa15.66■□□□□ 0.1
TNFRSF1A-209ENST00000536717 OXGR1Q96P68 337 aa15.66■□□□□ 0.1
TNFRSF1A-209ENST00000536717 PRSS27Q9BQR3 290 aa15.66■□□□□ 0.1
TNFRSF1A-209ENST00000536717 ZNF426Q9BUY5 554 aa15.66■□□□□ 0.1
TNFRSF1A-209ENST00000536717 SLC19A3Q9BZV2 496 aa15.66■□□□□ 0.1
TNFRSF1A-209ENST00000536717 LAMP3Q9UQV4 416 aa15.66■□□□□ 0.1
TNFRSF1A-209ENST00000536717 B3GALT5Q9Y2C3 310 aa15.66■□□□□ 0.1
TNFRSF1A-209ENST00000536717 ARFGEF3Q5TH69 2177 aa15.66■□□□□ 0.1
TNFRSF1A-209ENST00000536717 ZANQ9Y493 2812 aa15.66■□□□□ 0.1
TNFRSF1A-209ENST00000536717 A0A1W2PRQ8 180 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 FKBP6O75344 327 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 ZNF432O94892 652 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 BGLAPP02818 100 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 ZNF43P17038 809 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 CBLP22681 906 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 TGFBR3Q03167 851 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 DGCR6Q14129 220 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 NIPAL3Q6P499 406 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 PRSS57Q6UWY2 283 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 ZNF771Q7L3S4 317 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 LINGO2Q7L985 606 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 C17orf78Q8N4C9 275 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 TMEM255BQ8WV15 326 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 TMEM239Q8WW34 195 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 ALKBH3Q96Q83 286 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 DENND2DQ9H6A0 471 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 SLC17A5Q9NRA2 495 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 MAN2C1Q9NTJ4 1040 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 ZNF701Q9NV72 531 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 CSPG4Q6UVK1 2322 aa15.65■□□□□ 0.1
TNFRSF1A-209ENST00000536717 ANKRD65E5RJM6 399 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 TMCC2O75069 709 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 UPK3AO75631 287 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 KRT36O76013 467 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 GADD45GO95257 159 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 FOSL1P15407 271 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 RRM2P31350 389 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 ZNF83P51522 516 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 CLDN17P56750 224 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 PGGHGQ32M88 737 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 FGD3Q5JSP0 725 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 H1FNTQ75WM6 255 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 RRM2BQ7LG56 351 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 PAPD5Q8NDF8 572 aaKnown RBP15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 OR6S1Q8NH40 331 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 SMAP2Q8WU79 429 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 ACOT11Q8WXI4 607 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 BOD1Q96IK1 185 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 DHRS1Q96LJ7 313 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 MOGAT1Q96PD6 335 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 CXorf56Q9H5V9 222 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 MED31Q9Y3C7 131 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 NF1P21359 2839 aa15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 NIPBLQ6KC79 2804 aaeCLIP15.64■□□□□ 0.09
TNFRSF1A-209ENST00000536717 LOC102725191A0A1B0GVB3 256 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 LRRN3E7EW58 273 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 MS4A18H0YCH9 400 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 KPNA4O00629 521 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 TRAF3IP2O43734 574 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 CST1P01037 141 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 CDH2P19022 906 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 PTAFRP25105 342 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 CD40P25942 277 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 SPOCK1Q08629 439 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 MFSD13AQ14CX5 517 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 MS4A18Q3C1V0 323 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 OR2T5Q6IEZ7 315 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 TMEM108Q6UXF1 575 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 ZNF730Q6ZMV8 503 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 ABHD12BQ7Z5M8 362 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 PIAS4Q8N2W9 510 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 ADPRHL1Q8NDY3 354 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 OR2T29Q8NH02 315 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 OR52J3Q8NH60 311 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 SLCO4A1Q96BD0 722 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 DUS3LQ96G46 650 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 C1QTNF6Q9BXI9 259 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 LINC00470Q9BZP3 86 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 GSX1Q9H4S2 264 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 CISD1Q9NZ45 108 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 RCE1Q9Y256 329 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 AMDHD2Q9Y303 409 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 AP4S1Q9Y587 144 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 MAGED1Q9Y5V3 778 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 OR6C65A6NJZ3 312 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 ZNF587BE7ETH6 402 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 OVOL3O00110 214 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 KRT33AO76009 404 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 HPRP00739 348 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 FUT4P22083 530 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 UGT2B15P54855 530 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 CDH11P55287 796 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 RPS4XP62701 263 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 HIKESHIQ53FT3 197 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 KLHL17Q6TDP4 642 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 RNF113BQ8IZP6 322 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 C10orf53Q8N6V4 93 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 SCAIQ8N9R8 606 aa15.63■□□□□ 0.09
TNFRSF1A-209ENST00000536717 OR1K1Q8NGR3 316 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms