RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 LYPD8Q6UX82 237 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 TEX19Q8NA77 164 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 OR13C2Q8NGS9 318 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 OR8K3Q8NH51 312 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ENKURQ8TC29 256 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 RASL10BQ96S79 203 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 IFT27Q9BW83 186 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 SCNM1Q9BWG6 230 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ADGRL4Q9HBW9 690 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 KLHL21Q9UJP4 597 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 HRH3Q9Y5N1 445 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 BOD1L1Q8NFC6 3051 aa11.73□□□□□ -0.53
CDK5RAP3-202ENST00000536708 A0A1B0GWA3 101 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ZNF780AO75290 641 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 HPP00738 406 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 PRKAR1AP10644 381 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 NRG3P56975 720 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 KLHL26Q53HC5 615 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 FNDC7Q5VTL7 733 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 TIGD3Q6B0B8 471 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 SIGIRRQ6IA17 410 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 PLET1Q6UQ28 207 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CBLN3Q6UW01 205 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 B3GLCTQ6Y288 498 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 RTL4Q6ZR62 310 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 PXKQ7Z7A4 578 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 LRRC28Q86X40 367 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 PLCZ1Q86YW0 608 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CADM2Q8N3J6 435 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 M1APQ8TC57 530 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 TTC9Q92623 222 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 NXPE2Q96DL1 559 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 NIPAL2Q9H841 368 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 B3GAT2Q9NPZ5 323 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 UBQLN4Q9NRR5 601 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CYSLTR2Q9NS75 346 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ZC3H12DA2A288 527 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 SERINC4A6NH21 518 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 OR6C70A6NIJ9 312 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 RIIAD1A6NNX1 92 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ADAM10O14672 748 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 PPM1BO75688 479 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CRYZL1O95825 349 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 SAGP10523 405 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ZNF3P17036 446 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 SLC6A6P31641 620 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 PSMD4P55036 377 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ACTC1P68032 377 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ACTA1P68133 377 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ZNF85Q03923 595 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 FAPQ12884 760 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CLN3Q13286 438 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 IL18Q14116 193 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 DMKNQ6E0U4 476 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 MARCH3Q86UD3 253 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 NR2C2APQ86WQ0 139 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 OR10H4Q8NGA5 316 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 OR10G3Q8NGC4 313 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 OR5L2Q8NGL0 311 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 NACC2Q96BF6 587 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 GALNT9Q9HCQ5 603 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ANKRD10Q9NXR5 420 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ZMIZ1Q9ULJ6 1067 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 WASF3Q9UPY6 502 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 NCKAP5O14513 1909 aa11.72□□□□□ -0.53
CDK5RAP3-202ENST00000536708 MED12Q93074 2177 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 SPENQ96T58 3664 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 A0A0X1KG70 313 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 C2orf72A6NCS6 295 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 SCDO00767 359 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ARHGEF9O43307 516 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 LYRM1O43325 122 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CSTAP01040 98 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 IFNGP01579 166 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 HPGDP15428 266 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 EVI2BP34910 448 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 THBS2P35442 1172 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 PNLIPRP2P54317 469 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CLDN20P56880 219 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CRMP1Q14194 572 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 KLHL12Q53G59 568 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 SMUG1Q53HV7 270 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ZNF468Q5VIY5 522 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ARHGAP11AQ6P4F7 1023 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ZNF550Q7Z398 422 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 YIPF7Q8N8F6 280 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ABHD4Q8TB40 342 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 PHOSPHO1Q8TCT1 267 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 GRHL3Q8TE85 626 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 ZNF524Q96C55 264 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 PGLYRP3Q96LB9 341 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 MARVELD1Q9BSK0 173 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 TRAF4Q9BUZ4 470 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 MFRPQ9BY79 579 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CDCP1Q9H5V8 836 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 MCCC2Q9HCC0 563 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 CACNA1AO00555 2505 aa11.71□□□□□ -0.53
CDK5RAP3-202ENST00000536708 PRRC2CQ9Y520 2896 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms