RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MED31Q9Y3C7 131 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 V9GYQ6 96 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 PLCE1Q9P212 2302 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 IGHV1-18A0A0C4DH31 117 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 ZNF726A6NNF4 738 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 CD8AP01732 235 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 HIST1H2ABP04908 130 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 CELA3BP08861 270 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 TSPAN19P0C672 248 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 PTAFRP25105 342 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 NKX6-1P78426 367 aaPredicted RBP11.48□□□□□ -0.57
PRKDC-206ENST00000536429 ST3GAL3Q11203 375 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 KRT72Q14CN4 511 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 LAPTM4AQ15012 233 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 FXNQ16595 210 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 Q5PR19 223 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 TBPL2Q6SJ96 375 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 SLC22A25Q6T423 547 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 KLHL24Q6TFL4 600 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 HIST3H2AQ7L7L0 130 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 NRMQ8IXM6 262 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 DEFB107AQ8IZN7 70 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 OR6X1Q8NH79 312 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 MAGEE2Q8TD90 523 aaPredicted RBP11.48□□□□□ -0.57
PRKDC-206ENST00000536429 HIST1H2ACQ93077 130 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 TMEM54Q969K7 222 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 LRR1Q96L50 414 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 HS6ST2Q96MM7 605 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 FNDC11Q9BVV2 318 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 NOX3Q9HBY0 568 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 DCAF13Q9NV06 445 aaKnown RBP11.48□□□□□ -0.57
PRKDC-206ENST00000536429 CISD1Q9NZ45 108 aaKnown RBP11.48□□□□□ -0.57
PRKDC-206ENST00000536429 NDUFAF4Q9P032 175 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 ENPP4Q9Y6X5 453 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 DSCAMO60469 2012 aa11.48□□□□□ -0.57
PRKDC-206ENST00000536429 A0A087WUU8 490 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 ARPC4-TTLL3A0A0A6YYG9 625 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 ZNF99A8MXY4 864 aaPredicted RBP11.47□□□□□ -0.57
PRKDC-206ENST00000536429 ATP6V1G2-DDX39BF2Z307 99 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 DIRAS1O95057 198 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 WNT11O96014 354 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 IGF2P01344 180 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 IFI30P13284 250 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 HSD17B1P14061 328 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 CDKN1AP38936 164 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 CSNK1A1P48729 337 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 PTH2RP49190 550 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 SH3BGRP55822 239 aaPredicted RBP11.47□□□□□ -0.57
PRKDC-206ENST00000536429 UBE2NP61088 152 aaKnown RBP11.47□□□□□ -0.57
PRKDC-206ENST00000536429 VLDLRP98155 873 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 FHL1Q13642 323 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 TRAM2Q15035 370 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 IQCCQ4KMZ1 466 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 GKAP1Q5VSY0 366 aaPredicted RBP11.47□□□□□ -0.57
PRKDC-206ENST00000536429 LRFN4Q6PJG9 635 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 CCDC197Q8NCU1 140 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 OR6N1Q8NGY5 312 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 TMEM171Q8WVE6 324 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 LIPHQ8WWY8 451 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 HTRA1Q92743 480 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 C7orf34Q96L11 122 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 SLC38A2Q96QD8 506 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 GSX2Q9BZM3 304 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 ULBP2Q9BZM5 246 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 NMNAT1Q9HAN9 279 aaPredicted RBP11.47□□□□□ -0.57
PRKDC-206ENST00000536429 OBP2BQ9NPH6 170 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 DLL4Q9NR61 685 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 MOKQ9UQ07 419 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 ANK3Q12955 4377 aaKnown RBP11.47□□□□□ -0.57
PRKDC-206ENST00000536429 MED13LQ71F56 2210 aa11.47□□□□□ -0.57
PRKDC-206ENST00000536429 TRAV27A0A087WT01 109 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 hCG_2039718K7EN88 272 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 OVOL3O00110 214 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 ARPC2O15144 300 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 BCL10O95999 233 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 HLA-HP01893 362 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 SEMG1P04279 462 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 CECR9P0C854 216 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 PGA4P0DJD7 388 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 PGA3P0DJD8 388 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 T-ENOLP0DO92 83 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 CD99P14209 185 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 B4GALT1P15291 398 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 RPS4XP62701 263 aaKnown RBP11.46□□□□□ -0.57
PRKDC-206ENST00000536429 MXRA7P84157 204 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 SAMD4BQ5PRF9 694 aaKnown RBP11.46□□□□□ -0.57
PRKDC-206ENST00000536429 C16orf89Q6UX73 402 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 RINLQ6ZS11 566 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 MDP1Q86V88 176 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 IGFN1Q86VF2 1251 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 LRRC75A-AS1Q8N1F1 130 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 OR13C2Q8NGS9 318 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 ASB10Q8WXI3 467 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 BPIFA2Q96DR5 249 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 SLC25A44Q96H78 314 aaPredicted RBP11.46□□□□□ -0.57
PRKDC-206ENST00000536429 ZNF347Q96SE7 839 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 TRAF4Q9BUZ4 470 aaPredicted RBP11.46□□□□□ -0.57
PRKDC-206ENST00000536429 GORASP2Q9H8Y8 452 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 ZNF701Q9NV72 531 aaPredicted RBP11.46□□□□□ -0.57
PRKDC-206ENST00000536429 GLTPQ9NZD2 209 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms