RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 UPK3AO75631 287 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 DPP4P27487 766 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 ITPKBP27987 946 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 Q499Y3 187 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 BTN2A1Q7KYR7 527 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 OR6V1Q8N148 313 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 ZNF687Q8N1G0 1237 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 BEST4Q8NFU0 473 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 OR2T4Q8NH00 348 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 OIT3Q8WWZ8 545 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 SLC25A38Q96DW6 304 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 ZDHHC12Q96GR4 267 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 ELF4Q99607 663 aaPredicted RBP11.95□□□□□ -0.5
LDLR-203ENST00000535915 RTN4RQ9BZR6 473 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 DHCR7Q9UBM7 475 aaKnown RBP11.95□□□□□ -0.5
LDLR-203ENST00000535915 EPHA6Q9UF33 1036 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 MMACHCQ9Y4U1 282 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 ASXL3Q9C0F0 2248 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 ABCA7Q8IZY2 2146 aa11.95□□□□□ -0.5
LDLR-203ENST00000535915 CEP192Q8TEP8 1941 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 TSC22D2O75157 780 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 NUDT14O95848 222 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 TXNDC12O95881 172 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 RENP00797 406 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 ANXA3P12429 323 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 CTRB1P17538 263 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 CXCL3P19876 107 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 CXCR1P25024 350 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 CD27P26842 260 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 IL12BP29460 328 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 RPS27P42677 84 aaKnown RBP11.94□□□□□ -0.5
LDLR-203ENST00000535915 ZNF117Q03924 483 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 ANGPT1Q15389 498 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 GSG1Q2KHT4 349 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 EMC4Q5J8M3 183 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 PXDC1Q5TGL8 231 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 CTRB2Q6GPI1 263 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 STAC2Q6ZMT1 411 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 CREB3L2Q70SY1 520 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 CDC20BQ86Y33 519 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 SYNPRQ8TBG9 265 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 BEX1Q9HBH7 125 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 EMC7Q9NPA0 242 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 UCKL1Q9NWZ5 548 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 SLCO1C1Q9NYB5 712 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 NKIRAS2Q9NYR9 191 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 AKAP7Q9P0M2 348 aaPredicted RBP11.94□□□□□ -0.5
LDLR-203ENST00000535915 RCE1Q9Y256 329 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 RHPN2P1A8MT19 583 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 SYPP08247 313 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 MAPK3P27361 379 aaPredicted RBP11.94□□□□□ -0.5
LDLR-203ENST00000535915 AP2S1P53680 142 aaPredicted RBP11.94□□□□□ -0.5
LDLR-203ENST00000535915 TAGLNQ01995 201 aaKnown RBP11.94□□□□□ -0.5
LDLR-203ENST00000535915 ZP2Q05996 745 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 SFRP4Q6FHJ7 346 aaPredicted RBP11.94□□□□□ -0.5
LDLR-203ENST00000535915 DPY19L4Q7Z388 723 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 OR52I2Q8NH67 350 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 OR56B4Q8NH76 319 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 ZNF721Q8TF20 911 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 ZNF431Q8TF32 576 aaPredicted RBP11.94□□□□□ -0.5
LDLR-203ENST00000535915 THEM6Q8WUY1 208 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 ADIPOR1Q96A54 375 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 S100A16Q96FQ6 103 aaKnown RBP11.94□□□□□ -0.5
LDLR-203ENST00000535915 CCDC120Q96HB5 630 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 LAT2Q9GZY6 243 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 SYT4Q9H2B2 425 aa11.94□□□□□ -0.5
LDLR-203ENST00000535915 A0A1B0GTH9 108 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 A0A1W2PR77 199 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 C17orf51A8MQB3 221 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 H3BSH0 61 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 DDAH2O95865 285 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 IGKV3-11P04433 115 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 SLC6A8P48029 635 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 ARL4DP49703 201 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 TOMM34Q15785 309 aaPredicted RBP11.93□□□□□ -0.5
LDLR-203ENST00000535915 ST3GAL2Q16842 350 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 PRAMEF17Q5VTA0 474 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 LUZP2Q86TE4 346 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 MSANTD3Q96H12 275 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 ACTR6Q9GZN1 396 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 ADAM19Q9H013 955 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 C20orf85Q9H1P6 137 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 RANBP3Q9H6Z4 567 aaPredicted RBP11.93□□□□□ -0.5
LDLR-203ENST00000535915 WDR76Q9H967 626 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 OR5V1Q9UGF6 321 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 MGAT4AQ9UM21 535 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 C11orf98E9PRG8 122 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 GABARAPH6UMI1 98 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 ZNF593O00488 134 aaPredicted RBP11.93□□□□□ -0.5
LDLR-203ENST00000535915 KHNYNO15037 678 aaKnown RBP11.93□□□□□ -0.5
LDLR-203ENST00000535915 SHOXO15266 292 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 SSNA1O43805 119 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 AKR7A3O95154 331 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 ABHD16AO95870 558 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 GPANK1O95872 356 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 NR0B1P51843 470 aaKnown RBP11.93□□□□□ -0.5
LDLR-203ENST00000535915 RAG2P55895 527 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 ODF4Q2M2E3 257 aa11.93□□□□□ -0.5
LDLR-203ENST00000535915 ESCO2Q56NI9 601 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms