RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 UPK3AO75631 287 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 LYZL6O75951 148 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 NDUFB2O95178 105 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 PPP3CBP16298 524 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 IL32P24001 234 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 MPGP29372 298 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
SF3B2-214ENST00000533595 GSSP48637 474 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 IST1P53990 364 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 CTXN1P60606 82 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 TSPAN31Q12999 210 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 CAMK2DQ13557 499 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 MELKQ14680 651 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 TSC22D1Q15714 1073 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 ACKR1Q16570 336 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 ANKRD34AQ69YU3 496 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 BHLHA15Q7RTS1 189 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-214ENST00000533595 IGFN1Q86VF2 1251 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 C20orf196Q8IYI0 205 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 ZNF433Q8N7K0 673 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-214ENST00000533595 LRRC75AQ8NAA5 344 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 OR6N1Q8NGY5 312 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 LINC01560Q8TB33 94 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 LRR1Q96L50 414 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 ALKBH3Q96Q83 286 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-214ENST00000533595 ACTR6Q9GZN1 396 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 OR10A4Q9H209 315 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 TXNIPQ9H3M7 391 aa12.85□□□□□ -0.35
SF3B2-214ENST00000533595 UNC79Q9P2D8 2635 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 DCHS2Q6V1P9 2916 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 CIB4A0PJX0 185 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 SH3D21A4FU49 640 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 PDLIM1O00151 329 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 GASTP01350 101 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 IGHMP01871 453 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 ITGA5P08648 1049 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 ZNF26P17031 533 aaPredicted RBP12.84□□□□□ -0.35
SF3B2-214ENST00000533595 CSNK1A1P48729 337 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 FOXG1P55316 489 aaPredicted RBP12.84□□□□□ -0.35
SF3B2-214ENST00000533595 TGFBR3Q03167 851 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 C9orf135Q5VTT2 229 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 HMBOX1Q6NT76 420 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 SMARCD3Q6STE5 483 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 TMEM179BQ7Z7N9 219 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 WDFY1Q8IWB7 410 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 C10orf67Q8IYJ2 551 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 AQP11Q8NBQ7 271 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 OR10G2Q8NGC3 310 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 FANK1Q8TC84 345 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 GIPC3Q8TF64 312 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 FAM222BQ8WU58 562 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 ASB10Q8WXI3 467 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 ZNF566Q969W8 418 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 S100PBPQ96BU1 408 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 SLC25A44Q96H78 314 aaPredicted RBP12.84□□□□□ -0.35
SF3B2-214ENST00000533595 DACH2Q96NX9 599 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 WFIKKN1Q96NZ8 548 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 USB1Q9BQ65 265 aaKnown RBP12.84□□□□□ -0.35
SF3B2-214ENST00000533595 MED18Q9BUE0 208 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 POLDIP3Q9BY77 421 aaKnown RBP12.84□□□□□ -0.35
SF3B2-214ENST00000533595 DENND2DQ9H6A0 471 aaPredicted RBP12.84□□□□□ -0.35
SF3B2-214ENST00000533595 B3GAT2Q9NPZ5 323 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 CRIM1Q9NZV1 1036 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 STX18Q9P2W9 335 aaKnown RBP12.84□□□□□ -0.35
SF3B2-214ENST00000533595 KCNN3Q9UGI6 736 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 MGAT4BQ9UQ53 548 aa12.84□□□□□ -0.35
SF3B2-214ENST00000533595 ARRDC5A6NEK1 342 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 M0R3G1 203 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 IGHG1P01857 330 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 CD14P08571 375 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 EPXP11678 715 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 FCGR1AP12314 374 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 FASP25445 335 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 ARHGDIAP52565 204 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 FXYD6P3P58550 94 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 RPL27P61353 136 aaKnown RBP12.83□□□□□ -0.36
SF3B2-214ENST00000533595 ERVK-25P63136 954 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 ROR2Q01974 943 aaKnown RBP12.83□□□□□ -0.36
SF3B2-214ENST00000533595 TOP3AQ13472 1001 aaPredicted RBP12.83□□□□□ -0.36
SF3B2-214ENST00000533595 ATP6AP1Q15904 470 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 ARMC4Q5T2S8 1044 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 ZNF787Q6DD87 383 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 OR7E24Q6IFN5 339 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 LINGO2Q7L985 606 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 PYDC1Q8WXC3 89 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 KATNB1Q9BVA0 655 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 DGCR6LQ9BY27 220 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 OR52D1Q9H346 318 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 NTN4Q9HB63 628 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 GPR35Q9HC97 309 aa12.83□□□□□ -0.36
SF3B2-214ENST00000533595 PDP1Q9P0J1 537 aaPredicted RBP12.83□□□□□ -0.36
SF3B2-214ENST00000533595 ZNF346Q9UL40 294 aaKnown RBP12.83□□□□□ -0.36
SF3B2-214ENST00000533595 A6NIZ1 184 aa12.82□□□□□ -0.36
SF3B2-214ENST00000533595 CENPBD1B2RD01 187 aa12.82□□□□□ -0.36
SF3B2-214ENST00000533595 RPL36A-HNRNPH2H7BZ11 118 aa12.82□□□□□ -0.36
SF3B2-214ENST00000533595 CASKO14936 926 aa12.82□□□□□ -0.36
SF3B2-214ENST00000533595 RAD51DO75771 328 aa12.82□□□□□ -0.36
SF3B2-214ENST00000533595 PGA4P0DJD7 388 aa12.82□□□□□ -0.36
SF3B2-214ENST00000533595 PGA3P0DJD8 388 aa12.82□□□□□ -0.36
SF3B2-214ENST00000533595 ACADSP16219 412 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms