RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 FOXL1Q12952 345 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 DPY19L1Q2PZI1 675 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 C1QL2Q7Z5L3 287 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 SKA3Q8IX90 412 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 TMEM123Q8N131 208 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 FGFBP3Q8TAT2 258 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 ZBTB9Q96C00 473 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 ZBTB18Q99592 522 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 ULBP2Q9BZM5 246 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 RNF121Q9H920 327 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 HINT3Q9NQE9 182 aaKnown RBP11.14□□□□□ -0.63
COPB1-209ENST00000533096 SLC6A13Q9NSD5 602 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 DECR2Q9NUI1 292 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 RAP2CQ9Y3L5 183 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 CORINQ9Y5Q5 1042 aa11.14□□□□□ -0.63
COPB1-209ENST00000533096 A0A0G2JPF8 293 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 TMEM247A6NEH6 219 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 HNRNPCL2B2RXH8 293 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 HNRNPCL3B7ZW38 293 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 HNRNPCL1O60812 293 aaKnown RBP11.13□□□□□ -0.63
COPB1-209ENST00000533096 RP2O75695 350 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 PRSS23O95084 383 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 HNRNPCL4P0DMR1 293 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 SLC1A6P48664 564 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 LCN2P80188 198 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 TXNL4AP83876 142 aaKnown RBP11.13□□□□□ -0.63
COPB1-209ENST00000533096 ZP4Q12836 540 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 PMS2P3Q13401 168 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 FXNQ16595 210 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 MIDNQ504T8 468 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 RGS7BPQ6MZT1 257 aaPredicted RBP11.13□□□□□ -0.63
COPB1-209ENST00000533096 NET1Q7Z628 596 aaPredicted RBP11.13□□□□□ -0.63
COPB1-209ENST00000533096 WDFY1Q8IWB7 410 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 SIGLECL1Q8N7X8 197 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 SYNPRQ8TBG9 265 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 CCL17Q92583 94 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 TAF15Q92804 592 aaKnown RBP eCLIP11.13□□□□□ -0.63
COPB1-209ENST00000533096 SLC38A4Q969I6 547 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 RAB39BQ96DA2 213 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 TMEM19Q96HH6 336 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 ZNF75AQ96N20 296 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 ZIM3Q96PE6 472 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 ZNF696Q9H7X3 374 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 UBAP1Q9NZ09 502 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 GPR160Q9UJ42 338 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 IFT52Q9Y366 437 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 CACNG2Q9Y698 323 aa11.13□□□□□ -0.63
COPB1-209ENST00000533096 TRAV36DV7A0A075B6V5 113 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 A0A087WUJ7 227 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 IGHV1-69-2A0A0G2JMI3 117 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 C17orf100A8MU93 164 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 TRAF3IP2O43734 574 aaPredicted RBP11.12□□□□□ -0.63
COPB1-209ENST00000533096 SERPINE1P05121 402 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 ALDOCP09972 364 aaKnown RBP11.12□□□□□ -0.63
COPB1-209ENST00000533096 HKR1P10072 659 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 DRD4P21917 467 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 ZFP36P26651 326 aaKnown RBP11.12□□□□□ -0.63
COPB1-209ENST00000533096 ERVS71-1P61550 626 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 MRPS11P82912 194 aaKnown RBP11.12□□□□□ -0.63
COPB1-209ENST00000533096 GLO1Q04760 184 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 GTDC1Q4AE62 458 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 FAM69AQ5T7M9 428 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 RNF220Q5VTB9 566 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 USP51Q70EK9 711 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 SNX33Q8WV41 574 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 C11orf40Q8WZ69 217 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 GTF3AQ92664 365 aaKnown RBP11.12□□□□□ -0.63
COPB1-209ENST00000533096 RAB1CQ92928 201 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 MAL2Q969L2 176 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 FOXB1Q99853 325 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 SH3GL3Q99963 347 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 ZNF385DQ9H6B1 395 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 WDR55Q9H6Y2 383 aaPredicted RBP11.12□□□□□ -0.63
COPB1-209ENST00000533096 TPT1P8Q9HAU6 139 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 NTN4Q9HB63 628 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 CDH20Q9HBT6 801 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 SELENONQ9NZV5 590 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 PRDM4Q9UKN5 801 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 WIPI2Q9Y4P8 454 aa11.12□□□□□ -0.63
COPB1-209ENST00000533096 MEGF8Q7Z7M0 2845 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 LOC102725191A0A1B0GVB3 256 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 A0A1B0GWA3 101 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 ISPDA4D126 451 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 LRRN3E7EW58 273 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 C11orf98E9PRG8 122 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 J3QLI3 93 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 UBL3O95164 117 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 SERPINA5P05154 406 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 NUDT7P0C024 238 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 BGNP21810 368 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 CRYBB2P43320 205 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 MVDP53602 400 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 KLF3P57682 345 aaPredicted RBP11.11□□□□□ -0.63
COPB1-209ENST00000533096 TEKQ02763 1124 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 RBBP4Q09028 425 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 STX3Q13277 289 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 HFEQ30201 348 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 ALG10BQ5I7T1 473 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 NXNQ6DKJ4 435 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 237 ms