RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 IFNGR1P15260 489 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 FUT1P19526 365 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 FUT4P22083 530 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 BIDP55957 195 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 UBE2NP61088 152 aaKnown RBP13.43□□□□□ -0.26
CPSF1-210ENST00000532935 GLYATQ6IB77 296 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 SLC35D2Q76EJ3 337 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 KRTAP1-3Q8IUG1 177 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 OFCC1Q8IZS5 231 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 PGAM4Q8N0Y7 254 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 RBM15BQ8NDT2 890 aaKnown RBP13.43□□□□□ -0.26
CPSF1-210ENST00000532935 SMAP2Q8WU79 429 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-210ENST00000532935 PERPQ96FX8 193 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 FNDC11Q9BVV2 318 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 CXorf56Q9H5V9 222 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 B3GAT2Q9NPZ5 323 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 MAN2C1Q9NTJ4 1040 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 CISD1Q9NZ45 108 aaKnown RBP13.43□□□□□ -0.26
CPSF1-210ENST00000532935 RHCGQ9UBD6 479 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 RPS6KA6Q9UK32 745 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 LAMP3Q9UQV4 416 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 RRP15Q9Y3B9 282 aaKnown RBP13.43□□□□□ -0.26
CPSF1-210ENST00000532935 ZNF99A8MXY4 864 aaPredicted RBP13.42□□□□□ -0.26
CPSF1-210ENST00000532935 FFAR1O14842 300 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 ARHGEF9O43307 516 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 PIP5K1CO60331 668 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 GMNNO75496 209 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 SOD3P08294 240 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 DANCRP0C864 163 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 CALB2P22676 271 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 PAX7P23759 505 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 MNAT1P51948 309 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 RPS4XP62701 263 aaKnown RBP13.42□□□□□ -0.26
CPSF1-210ENST00000532935 TUBA1BP68363 451 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 TUBA4AP68366 448 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 RPL18Q07020 188 aaKnown RBP13.42□□□□□ -0.26
CPSF1-210ENST00000532935 TRAM2Q15035 370 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 PGGHGQ32M88 737 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 SAMD4BQ5PRF9 694 aaKnown RBP13.42□□□□□ -0.26
CPSF1-210ENST00000532935 SHEQ5VZ18 495 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 SLC22A25Q6T423 547 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 TUBA1AQ71U36 451 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 DEPDC4Q8N2C3 294 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 FAM156AQ8NDB6 213 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 WFDC11Q8NEX6 87 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 OR6N1Q8NGY5 312 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 OR6X1Q8NH79 312 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 LIPHQ8WWY8 451 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 NSL1Q96IY1 281 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 ADAD1Q96M93 576 aaKnown RBP13.42□□□□□ -0.26
CPSF1-210ENST00000532935 TMUB1Q9BVT8 246 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 GSX2Q9BZM3 304 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 ULBP2Q9BZM5 246 aa13.42□□□□□ -0.26
CPSF1-210ENST00000532935 DCAF13Q9NV06 445 aaKnown RBP13.42□□□□□ -0.26
CPSF1-210ENST00000532935 HTR3EA5X5Y0 456 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 PRSS23O95084 383 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 HSD17B1P14061 328 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 CD99P14209 185 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 PAX1P15863 534 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 TCN1P20061 433 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-210ENST00000532935 CSNK1A1P48729 337 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 PTH2RP49190 550 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 MXRA7P84157 204 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 MELKQ14680 651 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 FXNQ16595 210 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 Q5PR19 223 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 C16orf89Q6UX73 402 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 CYP4Z1Q86W10 505 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 TMEM54Q969K7 222 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 BPIFA2Q96DR5 249 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 SLC38A2Q96QD8 506 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 CDRT15Q96T59 188 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 GORASP2Q9H8Y8 452 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 ZNF701Q9NV72 531 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-210ENST00000532935 NDE1Q9NXR1 346 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 CD300AQ9UGN4 299 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 POU2F3Q9UKI9 436 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 SAMD4AQ9UPU9 718 aaKnown RBP13.41□□□□□ -0.26
CPSF1-210ENST00000532935 ENPP4Q9Y6X5 453 aa13.41□□□□□ -0.26
CPSF1-210ENST00000532935 IGHV1-18A0A0C4DH31 117 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 A0A1W2PRG6 482 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 E7EQL1 145 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 OVOL3O00110 214 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 SEC14L2O76054 403 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 BCL10O95999 233 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 F13BP05160 661 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 TSPAN19P0C672 248 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 IFI30P13284 250 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 AQP2P41181 271 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.261e-6■■■■□ 19.8
CPSF1-210ENST00000532935 PRSS57Q6UWY2 283 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 B3GLCTQ6Y288 498 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 TSEN54Q7Z6J9 526 aaKnown RBP13.4□□□□□ -0.26
CPSF1-210ENST00000532935 NRMQ8IXM6 262 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 DEFB107AQ8IZN7 70 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 MOSPD2Q8NHP6 518 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 ACOT11Q8WXI4 607 aaPredicted RBP13.4□□□□□ -0.26
CPSF1-210ENST00000532935 ZNF566Q969W8 418 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 SLC25A44Q96H78 314 aaPredicted RBP13.4□□□□□ -0.26
CPSF1-210ENST00000532935 MOV10Q9HCE1 1003 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms