RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 C1DQ13901 141 aaKnown RBP11.11□□□□□ -0.63
COPB1-208ENST00000532088 TMEM201Q5SNT2 666 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 GPR139Q6DWJ6 353 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 FAM214BQ7L5A3 538 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 FAM122BQ7Z309 247 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 GPAT4Q86UL3 456 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 MEX3DQ86XN8 651 aaKnown RBP11.11□□□□□ -0.63
COPB1-208ENST00000532088 KIF18BQ86Y91 864 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 OR2T33Q8NG76 320 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 OR6K3Q8NGY3 331 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 MOSPD2Q8NHP6 518 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 TEX47Q8TBZ9 253 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 MAGEE2Q8TD90 523 aaPredicted RBP11.11□□□□□ -0.63
COPB1-208ENST00000532088 SLC29A1Q99808 456 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 SFXN3Q9BWM7 321 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 SLC25A19Q9HC21 320 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 ZNF629Q9UEG4 869 aaPredicted RBP11.11□□□□□ -0.63
COPB1-208ENST00000532088 EMC9Q9Y3B6 208 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 POLEQ07864 2286 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 PHF3Q92576 2039 aaKnown RBP11.11□□□□□ -0.63
COPB1-208ENST00000532088 FAM208BQ5VWN6 2430 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 ARHGAP21Q5T5U3 1957 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 A0A096LPE4 126 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 A0A1W2PPZ6 126 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 A6NIZ1 184 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 KDM4EB2RXH2 506 aaPredicted RBP11.1□□□□□ -0.63
COPB1-208ENST00000532088 MCIDASD6RGH6 385 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 E9PQ18 207 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 C11orf98E9PRG8 122 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 BHLHE40O14503 412 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 AHCYL1O43865 530 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 TOXO94900 526 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 CNOT4O95628 575 aaKnown RBP11.1□□□□□ -0.63
COPB1-208ENST00000532088 TMIGD3P0DMS9 266 aaPredicted RBP11.1□□□□□ -0.63
COPB1-208ENST00000532088 EPHA1P21709 976 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 GNLYP22749 145 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 CTSSP25774 331 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 AGTR1P30556 359 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 SDHAP31040 664 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 RPL4P36578 427 aaKnown RBP11.1□□□□□ -0.63
COPB1-208ENST00000532088 CRISP1P54107 249 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 PER3P56645 1201 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 CTXN1P60606 82 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 RAP1BP61224 184 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 RPL27P61353 136 aaKnown RBP11.1□□□□□ -0.63
COPB1-208ENST00000532088 RAP1AP62834 184 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 CDK5Q00535 292 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 POU3F1Q03052 451 aaPredicted RBP11.1□□□□□ -0.63
COPB1-208ENST00000532088 SLC36A3Q495N2 470 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 LPCAT4Q643R3 524 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 SLC27A4Q6P1M0 643 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 SLC35D2Q76EJ3 337 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 GALNT5Q7Z7M9 940 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 TUSC5Q8IXB3 177 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 LNX2Q8N448 690 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 MARVELD2Q8N4S9 558 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 ZIC4Q8N9L1 334 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 OR6X1Q8NH79 312 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 FNDC8Q8TC99 324 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 RND1Q92730 232 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 INTS12Q96CB8 462 aaKnown RBP11.1□□□□□ -0.63
COPB1-208ENST00000532088 LRR1Q96L50 414 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 SAMD8Q96LT4 415 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 SNX18Q96RF0 628 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 POLDIP3Q9BY77 421 aaKnown RBP11.1□□□□□ -0.63
COPB1-208ENST00000532088 TBC1D23Q9NUY8 699 aa11.1□□□□□ -0.63
COPB1-208ENST00000532088 NOSIPQ9Y314 301 aaKnown RBP11.1□□□□□ -0.63
COPB1-208ENST00000532088 SMG1Q96Q15 3661 aaKnown RBP11.09□□□□□ -0.63
COPB1-208ENST00000532088 H3BN98 237 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 CCL21O00585 134 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 MRPL33O75394 65 aaKnown RBP11.09□□□□□ -0.63
COPB1-208ENST00000532088 TNFSF13O75888 250 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 ZNF432O94892 652 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 BCL10O95999 233 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 F13BP05160 661 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 NR2C1P13056 603 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 HLA-DOBP13765 273 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 GRK5P34947 590 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 OPRM1P35372 400 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 KIR2DL2P43627 348 aaPredicted RBP11.09□□□□□ -0.63
COPB1-208ENST00000532088 GIPRP48546 466 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 SMSP52788 366 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 IL1RL1Q01638 556 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 PMPCAQ10713 525 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 NPRL3Q12980 569 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 STK11Q15831 433 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 IGFBP7Q16270 282 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 ACKR1Q16570 336 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 ARMC4Q5T2S8 1044 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 ANKRD34AQ69YU3 496 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 ADCK1Q86TW2 530 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 LSRQ86X29 649 aaPredicted RBP11.09□□□□□ -0.63
COPB1-208ENST00000532088 KDM8Q8N371 416 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 RPRMLQ8N4K4 120 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 ARIH2OSQ8N7S6 290 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 OR8D4Q8NGM9 314 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 ZNF519Q8TB69 540 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 ASB10Q8WXI3 467 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 KATNB1Q9BVA0 655 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 TSSK6Q9BXA6 273 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms