RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 EYSQ5T1H1 3165 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 PRUNE2Q8WUY3 3088 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 C11orf98E9PRG8 122 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 AGRPO00253 132 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 TMCC2O75069 709 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 SERPINI2O75830 405 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 UMODP07911 640 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 UCHL1P09936 223 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ALOX5APP20292 161 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 MAPK3P27361 379 aaPredicted RBP13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 SHC1P29353 583 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 PUDPQ08623 228 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ANGPT1Q15389 498 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 PLA2G2CQ5R387 149 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF544Q6NX49 715 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 SNX29P2Q8IUI4 249 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ARMC10Q8N2F6 343 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF454Q8N9F8 522 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF511Q8NB15 262 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 FAM83FQ8NEG4 500 aaPredicted RBP13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF417Q8TAU3 575 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ATOH1Q92858 354 aaPredicted RBP13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 CMTM3Q96MX0 182 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 TAAR9Q96RI9 348 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF587Q96SQ5 575 aaPredicted RBP13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 MRI1Q9BV20 369 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 RNF32Q9H0A6 362 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 AKIRIN1Q9H9L7 192 aaPredicted RBP13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 CHST11Q9NPF2 352 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ALKBH4Q9NXW9 302 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ABRACLQ9P1F3 81 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 COMMD3Q9UBI1 195 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
ECHDC1-220ENST00000528402 ITGA10O75578 1167 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 COX6A1P12074 109 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 RAB3BP20337 219 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 PSMD7P51665 324 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 DNASE1L3Q13609 305 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 PLPPR5Q32ZL2 321 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 FAM199XQ6PEV8 388 aaPredicted RBP13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 HDDC2Q7Z4H3 204 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 LRRC28Q86X40 367 aaPredicted RBP13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 FADS6Q8N9I5 356 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 DRAXINQ8NBI3 349 aaPredicted RBP13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 OR2M3Q8NG83 312 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 OR10G3Q8NGC4 313 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 SMAP2Q8WU79 429 aaPredicted RBP13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 ZBTB8AQ96BR9 441 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 DDA1Q9BW61 102 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 SYT4Q9H2B2 425 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 GALNT9Q9HCQ5 603 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 PISDQ9UG56 409 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 HS3ST3B1Q9Y662 390 aa13.31□□□□□ -0.28
ECHDC1-220ENST00000528402 NSG1A0A0A6YYJ2 146 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 SHISA3A0PJX4 238 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 SLC22A23A1A5C7 686 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 LIPT2A6NK58 231 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 NOTOA8MTQ0 251 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 MS4A18H0YCH9 400 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 HNRNPCP07910 306 aaKnown RBP eCLIP13.3□□□□□ -0.283e-6■□□□□ 11
ECHDC1-220ENST00000528402 TFPIP10646 304 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 APEX1P27695 318 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 AVPR2P30518 371 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 TALDO1P37837 337 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 SSR4P51571 173 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 FOXF1Q12946 379 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 ALKBH1Q13686 389 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 SSPNQ14714 243 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF79Q15937 498 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 MS4A18Q3C1V0 323 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 IDNKQ5T6J7 187 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 OR5M10Q6IEU7 315 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 SLC18B1Q6NT16 456 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 C3orf33Q6P1S2 294 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 FDX2Q6P4F2 183 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 KCTD18Q6PI47 426 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 C6orf15Q6UXA7 325 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 RPTNQ6XPR3 784 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 PM20D2Q8IYS1 436 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 GHDCQ8N2G8 530 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 YIPF7Q8N8F6 280 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 OR4K17Q8NGC6 315 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 OR6N2Q8NGY6 317 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 OTOSQ8NHW6 89 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 ITPKCQ96DU7 683 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 RNF31Q96EP0 1072 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 TSSK2Q96PF2 358 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 OR11A1Q9GZK7 315 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 ACOXLQ9NUZ1 547 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 TEKT2Q9UIF3 430 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 LOXL2Q9Y4K0 774 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 A0A1W2PNV4 684 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 C17orf51A8MQB3 221 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 FAM171A2A8MVW0 826 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 NPIPA5E9PKD4 350 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 DLGAP3O95886 979 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 RAF1P04049 648 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 IL7P13232 177 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 CAV3P56539 151 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 GLO1Q04760 184 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms