RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 LSRQ86X29 649 aaPredicted RBP11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 CCDC36Q8IYA8 594 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 GPR137CQ8N3F9 429 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 LRRC75AQ8NAA5 344 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 OR4C15Q8NGM1 316 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 OR52J3Q8NH60 311 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 CANT1Q8WVQ1 401 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 TMEM54Q969K7 222 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 MUCL1Q96DR8 90 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 DUS3LQ96G46 650 aaKnown RBP11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 CHID1Q9BWS9 393 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 MRPL13Q9BYD1 178 aaKnown RBP11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 TXNIPQ9H3M7 391 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 SMURF2Q9HAU4 748 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 CCM2LQ9NUG4 571 aaPredicted RBP11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 MED29Q9NX70 200 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 AURKCQ9UQB9 309 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 SIGLEC7Q9Y286 467 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 AMDHD2Q9Y303 409 aa11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 MAGED1Q9Y5V3 778 aaPredicted RBP11.5□□□□□ -0.57
CNKSR1-211ENST00000528001 ARPC4-TTLL3A0A0A6YYG9 625 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 CIB4A0PJX0 185 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 A6NIZ1 184 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 ZNF99A8MXY4 864 aaPredicted RBP11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 TNFRSF11BO00300 401 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 CLOCKO15516 846 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 UPK3AO75631 287 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 IGHV3-9P01782 118 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 IGHG1P01857 330 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 HRGP04196 525 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 PGA4P0DJD7 388 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 PGA3P0DJD8 388 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 APEHP13798 732 aaKnown RBP11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 PRF1P14222 555 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 DNAJA1P31689 397 aaKnown RBP11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 GSSP48637 474 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 BIDP55957 195 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 RAP1BP61224 184 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 RAP1AP62834 184 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 CBX1P83916 185 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 SNTB1Q13884 538 aaKnown RBP11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 TAB1Q15750 504 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 C3orf36Q3SXR2 165 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 ARMC4Q5T2S8 1044 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 HMBOX1Q6NT76 420 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 RPL13AP3Q6NVV1 102 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 ANKRD16Q6P6B7 361 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 ZER1Q7Z7L7 766 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 SPATA24Q86W54 205 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 FAM169BQ8N8A8 192 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 ASB10Q8WXI3 467 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 ZNF566Q969W8 418 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 FAM46AQ96IP4 442 aaKnown RBP11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 TXNDC15Q96J42 360 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 REEP1Q9H902 201 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 GPR35Q9HC97 309 aa11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.49□□□□□ -0.57
CNKSR1-211ENST00000528001 DEFB108AA8MXU0 73 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 MCIDASD6RGH6 385 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 OR10H3O60404 316 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 RAD51DO75771 328 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 NDUFB2O95178 105 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 WNT11O96014 354 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 CD14P08571 375 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 GPR4P46093 362 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 CSNK1A1P48729 337 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 RPL27P61353 136 aaKnown RBP11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 ROR2Q01974 943 aaKnown RBP11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 TSPAN31Q12999 210 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 LAPTM4AQ15012 233 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 PPA1Q15181 289 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 ACKR1Q16570 336 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 ZNF770Q6IQ21 691 aaPredicted RBP11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 SEZ6L2Q6UXD5 910 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 C22orf34Q6ZV56 151 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 LINGO2Q7L985 606 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 OR1K1Q8NGR3 316 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 MOSPD2Q8NHP6 518 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 GNPDA2Q8TDQ7 276 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 RSRC1Q96IZ7 334 aaKnown RBP11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 ALKBH3Q96Q83 286 aaPredicted RBP11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 TNFRSF13CQ96RJ3 184 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 ALG12Q9BV10 488 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 EMC6Q9BV81 110 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 DGCR6LQ9BY27 220 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 DENND2DQ9H6A0 471 aaPredicted RBP11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 CRLF2Q9HC73 371 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 NRIP3Q9NQ35 241 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 SLC17A5Q9NRA2 495 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 ARMC1Q9NVT9 282 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 GLTPQ9NZD2 209 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 SLC25A15Q9Y619 301 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 CELSR2Q9HCU4 2923 aa11.48□□□□□ -0.57
CNKSR1-211ENST00000528001 TRAV27A0A087WT01 109 aa11.47□□□□□ -0.57
CNKSR1-211ENST00000528001 UNC119BA6NIH7 251 aa11.47□□□□□ -0.57
CNKSR1-211ENST00000528001 IMPA2O14732 288 aa11.47□□□□□ -0.57
CNKSR1-211ENST00000528001 FKBP6O75344 327 aa11.47□□□□□ -0.57
CNKSR1-211ENST00000528001 CIB2O75838 187 aa11.47□□□□□ -0.57
CNKSR1-211ENST00000528001 CCNB2O95067 398 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms