RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 E9PBE3 544 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 GOLGA8NF8WBI6 632 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 UBXN8O00124 270 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 SDHDO14521 159 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 OR1I1O60431 355 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 KLHL41O60662 606 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 KERAO60938 352 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 NIPSNAP2O75323 286 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 VPS26AO75436 327 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 ECI2O75521 394 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 TM7SF2O76062 418 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 TSPAN12O95859 305 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 COX4I1P13073 169 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 NCF2P19878 526 aaPredicted RBP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 IMPDH1P20839 514 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 RPS3P23396 243 aaKnown RBP eCLIP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 STK19P49842 368 aaPredicted RBP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 ATP6V0D1P61421 351 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 NTHL1P78549 312 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 RAD51Q06609 339 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 SCN1BQ07699 218 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 P2RY14Q15391 338 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 ACKR1Q16570 336 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 CDKN3Q16667 212 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 DNAL1Q4LDG9 190 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 ZNF678Q5SXM1 525 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 SHQ1Q6PI26 577 aaKnown RBP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 TMEM25Q86YD3 366 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 STK40Q8N2I9 435 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 ARL14Q8N4G2 192 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 ZNF557Q8N988 423 aaPredicted RBP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 CD200R1Q8TD46 325 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 FAM162AQ96A26 154 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 MCUR1Q96AQ8 359 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 ISG20Q96AZ6 181 aaKnown RBP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 ECHDC3Q96DC8 303 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 SNRNP40Q96DI7 357 aaKnown RBP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 VSIG2Q96IQ7 327 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 LYSMD1Q96S90 227 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 GPR21Q99679 349 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 SLC39A3Q9BRY0 314 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 DERL2Q9GZP9 239 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 VCX3BQ9H321 246 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 WDR55Q9H6Y2 383 aaPredicted RBP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 RNPEPL1Q9HAU8 725 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 EML4Q9HC35 981 aaKnown RBP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 TECRQ9NZ01 308 aaKnown RBP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 GALPQ9UBC7 116 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 TRMT6Q9UJA5 497 aaKnown RBP4.87□□□□□ -1.63
CTNND1-217ENST00000527599 HS3ST2Q9Y278 367 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 TMED5Q9Y3A6 229 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 GMEB1Q9Y692 573 aa4.87□□□□□ -1.63
CTNND1-217ENST00000527599 C1orf232A0A0U1RR37 186 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 WI2-2373I1.2A0A1W2PRP0 233 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 SUPT3HB4E1H0 165 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 CDC7O00311 574 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 UBFD1O14562 309 aaKnown RBP4.86□□□□□ -1.63
CTNND1-217ENST00000527599 PRMT5O14744 637 aaPredicted RBP4.86□□□□□ -1.63
CTNND1-217ENST00000527599 SUPT3HO75486 399 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 SUPT7LO94864 414 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 RPS17P08708 135 aaKnown RBP4.86□□□□□ -1.63
CTNND1-217ENST00000527599 SLC35E2P0CK97 266 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 TPBGLP0DKB5 382 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 S100A5P33763 92 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 CA5AP35218 305 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 SPAM1P38567 509 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 FRKP42685 505 aaPredicted RBP4.86□□□□□ -1.63
CTNND1-217ENST00000527599 CCNHP51946 323 aaPredicted RBP4.86□□□□□ -1.63
CTNND1-217ENST00000527599 NAA20P61599 178 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 HERVK_113P63132 956 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 DMC1Q14565 340 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 TSNQ15631 228 aaKnown RBP4.86□□□□□ -1.63
CTNND1-217ENST00000527599 CARD16Q5EG05 197 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 FAM151BQ6UXP7 276 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 CERS6Q6ZMG9 384 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 Q6ZRG5 221 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 RPS27LQ71UM5 84 aaKnown RBP4.86□□□□□ -1.63
CTNND1-217ENST00000527599 TAS2R42Q7RTR8 314 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 SNX20Q7Z614 316 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 NET1Q7Z628 596 aaPredicted RBP4.86□□□□□ -1.63
CTNND1-217ENST00000527599 SERPINA9Q86WD7 417 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 CPNE9Q8IYJ1 553 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 SIDT2Q8NBJ9 832 aaKnown RBP4.86□□□□□ -1.63
CTNND1-217ENST00000527599 ICA1LQ8NDH6 482 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 LINC01006Q8NI28 216 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 STAG3L4Q8TBR4 150 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 ZNF707Q96C28 371 aaPredicted RBP4.86□□□□□ -1.63
CTNND1-217ENST00000527599 OTUB2Q96DC9 234 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 CMTM5Q96DZ9 223 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 PPP1R36Q96LQ0 422 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 CATSPER2Q96P56 530 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 THTPAQ9BU02 230 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 BBS2Q9BXC9 721 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 ERVK-6Q9BXR3 956 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 LINC00597Q9H2U6 94 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 ASB8Q9H765 288 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 MEAF6Q9HAF1 191 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 APPL1Q9UKG1 709 aa4.86□□□□□ -1.63
CTNND1-217ENST00000527599 TMCO1Q9UM00 188 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms