RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CHRNB3Q05901 458 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 KPNB1Q14974 876 aaKnown RBP9.6□□□□□ -0.87
NEDD8-204ENST00000526430 TRAM2Q15035 370 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 OR7A5Q15622 319 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 SGCBQ16585 318 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 ZNF74Q16587 644 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 FAM120AOSQ5T036 256 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 FAM69AQ5T7M9 428 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 C1orf146Q5VVC0 180 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 ABLIM2Q6H8Q1 611 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 VWA1Q6PCB0 445 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 TTC33Q6PID6 262 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-204ENST00000526430 ZER1Q7Z7L7 766 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 SPATA24Q86W54 205 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 OR52J3Q8NH60 311 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 ABHD3Q8WU67 409 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 PLPPR2Q96GM1 343 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 LRGUKQ96M69 825 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 HS6ST2Q96MM7 605 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 PSD2Q9BQI7 771 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 FNDC11Q9BVV2 318 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 SLC19A3Q9BZV2 496 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 GRIP2Q9C0E4 1043 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 OPN3Q9H1Y3 402 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-204ENST00000526430 ANKRD19PQ9H560 264 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 ARMC1Q9NVT9 282 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 PAQR5Q9NXK6 330 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-204ENST00000526430 TAS2R5Q9NYW4 299 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 STOML1Q9UBI4 398 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 SPIN1Q9Y657 262 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-204ENST00000526430 IGKV3D-15A0A087WSY6 115 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 LOC102725191A0A1B0GVB3 256 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 AQP7P3A6NL99 342 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 KPNA4O00629 521 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-204ENST00000526430 CDC42EP2O14613 210 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 DNPH1O43598 174 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 ENTPD5O75356 428 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 PTP4A3O75365 173 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 AHSA1O95433 338 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 CH25HO95992 272 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 IGHV4-31P0DP07 118 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 ITGA2P17301 1181 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 GRPRP30550 384 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 SLC7A1P30825 629 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 RRM2P31350 389 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 OMPP47874 163 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 FXYD6P3P58550 94 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 DSCR9P59020 149 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 SLC35A1P78382 337 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 SLC17A1Q14916 467 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 EXOC3L2Q2M3D2 409 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 FAM98BQ52LJ0 330 aaKnown RBP9.59□□□□□ -0.87
NEDD8-204ENST00000526430 PRR31Q5SQ13 230 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 ANKRD34AQ69YU3 496 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 OR2T5Q6IEZ7 315 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 PAQR6Q6TCH4 344 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 C5orf46Q6UWT4 87 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 TMPRSS11FQ6ZWK6 438 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 MBOAT2Q6ZWT7 520 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 FCRLAQ7L513 359 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 NUFIP2Q7Z417 695 aaKnown RBP9.59□□□□□ -0.87
NEDD8-204ENST00000526430 EPHX4Q8IUS5 362 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 NRMQ8IXM6 262 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 RNF113BQ8IZP6 322 aaKnown RBP9.59□□□□□ -0.87
NEDD8-204ENST00000526430 KDM8Q8N371 416 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-204ENST00000526430 CNEP1R1Q8N9A8 125 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 LRRC75AQ8NAA5 344 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 OR2T29Q8NH02 315 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 LILRB1Q8NHL6 650 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-204ENST00000526430 RNF217Q8TC41 542 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 ZFAND2BQ8WV99 257 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 ACOT11Q8WXI4 607 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-204ENST00000526430 POP5Q969H6 163 aaKnown RBP9.59□□□□□ -0.87
NEDD8-204ENST00000526430 CPNE4Q96A23 557 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-204ENST00000526430 SLC25A36Q96CQ1 311 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 ZNF347Q96SE7 839 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 BCO1Q9HAY6 547 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 FANCFQ9NPI8 374 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 CLEC4AQ9UMR7 237 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 AURKCQ9UQB9 309 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 MAGED1Q9Y5V3 778 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-204ENST00000526430 VWFP04275 2813 aa9.59□□□□□ -0.87
NEDD8-204ENST00000526430 M0R082 166 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 PLPP3O14495 311 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 OR2T1O43869 369 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 NDUFS7O75251 213 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 TIPRLO75663 272 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 GADD45GO95257 159 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 HLA-DOBP13765 273 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 SLC25A16P16260 332 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 SLC16A1P53985 500 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 CSNK2A1P68400 391 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-204ENST00000526430 LAPTM4AQ15012 233 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 PDK3Q15120 406 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 PDSS1Q5T2R2 415 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 C1orf94Q6P1W5 598 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 TUSC5Q8IXB3 177 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 OR4K5Q8NGD3 323 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 ZNF417Q8TAU3 575 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms