RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SHPKQ9UHJ6 478 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 CTNNA3Q9UI47 895 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 RIMS3Q9UJD0 308 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 GNPTGQ9UJJ9 305 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 CFAP45Q9UL16 551 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 TRAF3IP3Q9Y228 551 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 STK38LQ9Y2H1 464 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 NEUROG3Q9Y4Z2 214 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 TIMM10BQ9Y5J6 103 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 PEX16Q9Y5Y5 336 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 NPTNQ9Y639 398 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 V9GY05 133 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 V9GYY5 206 aaPredicted RBP0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 RAD54L2Q9Y4B4 1467 aa0.97□□□□□ -2.25
ECHDC1-219ENST00000526299 TTC21BQ7Z4L5 1316 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 A0A1B0GUS0 222 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 OR52A4PA6NMU1 304 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 SNTNA6NMZ2 147 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 C12orf71A8MTZ7 269 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ZNF705EA8MWA4 302 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 SPECC1L-ADORA2AF8WAN1 911 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 UBXN8O00124 270 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 KIF2AO00139 706 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CXCL11O14625 94 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 AGPAT2O15120 278 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 NVLO15381 856 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 B4GALT5O43286 388 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 HCRTR1O43613 425 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 PRKAB2O43741 272 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 TIMM8AO60220 97 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 TOM1O60784 492 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 RAMP3O60896 148 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 DNAJB6O75190 326 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ERLIN1O75477 346 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ATP5LO75964 103 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 B3GAT3O94766 335 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ERLIN2O94905 339 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 OXSR1O95747 527 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 NDUFB10O96000 172 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 IGHG4P01861 327 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 KRT14P02533 472 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 C2P06681 752 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 TPM3P06753 285 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CCDC172P0C7W6 258 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 PNMA6AP0CW24 399 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CALM1P0DP23 149 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CALM2P0DP24 149 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CALM3P0DP25 149 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 SLC2A3P11169 496 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ABOP16442 354 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 TCN1P20061 433 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 MX1P20591 662 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 PAX7P23759 505 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 MMP11P24347 488 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 HMGB2P26583 209 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 PBLDP30039 288 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CCR1P32246 355 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 RORAP35398 523 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CCT6AP40227 531 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 SLC26A3P40879 764 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 MAGEA8P43361 318 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 KIR2DS4P43632 304 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 P2RY1P47900 373 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ATP5OP48047 213 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ARRB1P49407 418 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 GPM6AP51674 278 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ATP1B3P54709 279 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 UGT2B15P54855 530 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 AIF1P55008 147 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 LIM2P55344 173 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 TAS2R19P59542 299 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CNTN2Q02246 1040 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 SCRN3Q0VDG4 424 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 KLRB1Q12918 225 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 DNAJC3Q13217 504 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CUL2Q13617 745 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 PRPSAP1Q14558 356 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ATP6AP1Q15904 470 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CEP55Q53EZ4 464 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 SFT2D3Q587I9 215 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 HSP90AA4PQ58FG1 418 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 COA6Q5JTJ3 125 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 AP1ARQ63HQ0 302 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ATL3Q6DD88 541 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 TTC19Q6DKK2 380 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 PYHIN1Q6K0P9 492 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 UNQ9370/PRO34162Q6UXP9 181 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 C19orf35Q6ZS72 473 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 COX15Q7KZN9 410 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CENPQQ7L2Z9 268 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 CAMK2N1Q7Z7J9 78 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ZNF679Q8IYX0 411 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 FAM9CQ8IZT9 166 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 RDH10Q8IZV5 341 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 TMEM123Q8N131 208 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 LINC01561Q8N1V8 128 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 TCAIMQ8N3R3 496 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 KIR3DL3Q8N743 410 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 TRIML2Q8N7C3 387 aa0.96□□□□□ -2.26
ECHDC1-219ENST00000526299 ACOT4Q8N9L9 421 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms