RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ARHGDIAP52565 204 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 CTXN1P60606 82 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 CD47Q08722 323 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 CAMK2DQ13557 499 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 KEAP1Q14145 624 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 GK3PQ14409 553 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 MELKQ14680 651 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 TAB1Q15750 504 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 GABRA6Q16445 453 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 ACKR1Q16570 336 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 CEACAM16Q2WEN9 425 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 MS4A18Q3C1V0 323 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZBED5Q49AG3 693 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF704Q6ZNC4 412 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 C20orf204Q6ZNR8 217 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 TMPRSS11FQ6ZWK6 438 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 PIWIL3Q7Z3Z3 882 aaKnown RBP4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 CDC20BQ86Y33 519 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 AQP12AQ8IXF9 295 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 C20orf196Q8IYI0 205 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 TMEM123Q8N131 208 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 NOXO1Q8NFA2 376 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR52L1Q8NGH7 329 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR1K1Q8NGR3 316 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR13C2Q8NGS9 318 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR51A7Q8NH64 312 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 FANK1Q8TC84 345 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 SLC7A13Q8TCU3 470 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 FAM46AQ96IP4 442 aaKnown RBP4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 RADILQ96JH8 1075 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 CLPTM1LQ96KA5 538 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 DHRS1Q96LJ7 313 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 MUS81Q96NY9 551 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 EMC6Q9BV81 110 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 KCNN2Q9H2S1 579 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 TXNIPQ9H3M7 391 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 UBTD1Q9HAC8 227 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 GPR35Q9HC97 309 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 SLC17A5Q9NRA2 495 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 MAN2C1Q9NTJ4 1040 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 FAIMQ9NVQ4 179 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 TAS2R5Q9NYW4 299 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 GRHPRQ9UBQ7 328 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 POU2F3Q9UKI9 436 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 FBXL3Q9UKT7 428 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 HIF3AQ9Y2N7 669 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 SAMHD1Q9Y3Z3 626 aaKnown RBP4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 RNF115Q9Y4L5 304 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 PTPN13Q12923 2485 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 MED12Q93074 2177 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 FREM3P0C091 2139 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 DOCK7Q96N67 2140 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 ICE1Q9Y2F5 2266 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 HEATR5AQ86XA9 2040 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 A0A096LPE4 126 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ARPC4-TTLL3A0A0A6YYG9 625 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 A0A1W2PPZ6 126 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 TCRBV5S2A0A599 114 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 DEFB108AA8MXU0 73 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 PDLIM1O00151 329 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ACOT8O14734 319 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 GSC2O15499 205 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF432O94892 652 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 CCNB2O95067 398 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 UBL3O95164 117 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 RAB36O95755 333 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 CST1P01037 141 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 IGHMP01871 453 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 CRYAAP02489 173 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 RAF1P04049 648 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 THBDP07204 575 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 CD14P08571 375 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 QDPRP09417 244 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 PGA4P0DJD7 388 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 PGA3P0DJD8 388 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 HLA-DOBP13765 273 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ACADSP16219 412 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 FPR3P25089 353 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 EDNRAP25101 427 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 NOS3P29474 1203 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 SLC6A6P31641 620 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 NTF4P34130 210 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ACVR1BP36896 505 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 MAGEA2P43356 314 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 RPS6KA3P51812 740 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 RPL27P61353 136 aaKnown RBP4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 RPS4XP62701 263 aaKnown RBP4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 ARF1P84077 181 aaKnown RBP4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 MS4A2Q01362 244 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 BSPH1Q075Z2 132 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 LGALS3BPQ08380 585 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 TBRG1Q3YBR2 411 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 HIKESHIQ53FT3 197 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 C1orf146Q5VVC0 180 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 GPR139Q6DWJ6 353 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR2T5Q6IEZ7 315 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 RPL13AP3Q6NVV1 102 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 DNM1P34Q6PK57 102 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 TBPL2Q6SJ96 375 aa4.74□□□□□ -1.65
HMGB1P40-201ENST00000525121 SMARCD3Q6STE5 483 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms