RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 OR6N1Q8NGY5 312 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 OR6S1Q8NH40 331 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 FANK1Q8TC84 345 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 GNPDA2Q8TDQ7 276 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 GIPC3Q8TF64 312 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ASB10Q8WXI3 467 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 NRGNQ92686 78 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 HDAC2Q92769 488 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 KISS1RQ969F8 398 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ZFP3Q96NJ6 502 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 TSSK2Q96PF2 358 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ERMAPQ96PL5 475 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 RAB3IPQ96QF0 476 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 MED18Q9BUE0 208 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 IFT27Q9BW83 186 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SF3B5Q9BWJ5 86 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 POLDIP3Q9BY77 421 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 PLA2G12AQ9BZM1 189 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ULBP2Q9BZM5 246 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC19A3Q9BZV2 496 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ACTR6Q9GZN1 396 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SLCO5A1Q9H2Y9 848 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 OR52D1Q9H346 318 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 MMADHCQ9H3L0 296 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ANKRD19PQ9H560 264 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 CRLF2Q9HC73 371 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 GPR35Q9HC97 309 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 GLRX2Q9NS18 164 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ASB6Q9NWX5 421 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 DNAJB9Q9UBS3 223 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SIGLEC7Q9Y286 467 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 NOX1Q9Y5S8 564 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 FREM3P0C091 2139 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 SPTA1P02549 2419 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 HEATR5AQ86XA9 2040 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 PRRC2CQ9Y520 2896 aaKnown RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 A0A1W2PPL8 197 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF503-AS2A6NEH8 195 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF587BE7ETH6 402 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 H3BN98 237 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 M0R1B8 84 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 SIAH2O43255 324 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 HNRNPRO43390 633 aaKnown RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 FZD7O75084 574 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF432O94892 652 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 NDUFB2O95178 105 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 VAMP5O95183 116 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 PLAUP00749 431 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 TP53P04637 393 aaPredicted RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 SCG5P05408 212 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 QDPRP09417 244 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 PGA4P0DJD7 388 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 PGA3P0DJD8 388 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 B4GALT1P15291 398 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ACADSP16219 412 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 HIST1H1CP16403 213 aaKnown RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF23P17027 643 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 FPR3P25089 353 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 FASP25445 335 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 POLR2IP36954 125 aaKnown RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 CDKN2AP42771 156 aaKnown RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 CAPZA2P47755 286 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 CSNK1A1P48729 337 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 CENPAP49450 140 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 DAPP51397 102 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 HMGA2P52926 109 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 RPL27P61353 136 aaKnown RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 PIGFQ07326 219 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 SPOCK1Q08629 439 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 TSPAN31Q12999 210 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ITGADQ13349 1161 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 MFSD13AQ14CX5 517 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 TAB1Q15750 504 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ATP6AP1Q15904 470 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ETFDHQ16134 617 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 GABRA6Q16445 453 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 SGCAQ16586 387 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 LRRC36Q1X8D7 754 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC36A3Q495N2 470 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ARMC4Q5T2S8 1044 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 FBXW10Q5XX13 1052 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 C1orf94Q6P1W5 598 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 LRFN4Q6PJG9 635 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 UGT2A3Q6UWM9 527 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 LYPD4Q6UWN0 246 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF620Q6ZNG0 422 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 PTCHD4Q6ZW05 846 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF771Q7L3S4 317 aaPredicted RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 YTHDF3Q7Z739 585 aaKnown RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 PXKQ7Z7A4 578 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 MYPOPQ86VE0 399 aaPredicted RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 C20orf196Q8IYI0 205 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF295-AS1Q8N0V1 137 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 LRRC18Q8N456 261 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 WDR31Q8NA23 367 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ATG16L2Q8NAA4 619 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 CYB561A3Q8NBI2 242 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ADPRHL1Q8NDY3 354 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 SDR9C7Q8NEX9 313 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 NOXO1Q8NFA2 376 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms