RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 NINJ1Q92982 152 aa11.03□□□□□ -0.64
VEGFA-225ENST00000523950 CCDC124Q96CT7 223 aaKnown RBP11.03□□□□□ -0.64
VEGFA-225ENST00000523950 PIK3IP1Q96FE7 263 aa11.03□□□□□ -0.64
VEGFA-225ENST00000523950 SLC25A44Q96H78 314 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-225ENST00000523950 EMC6Q9BV81 110 aa11.03□□□□□ -0.64
VEGFA-225ENST00000523950 MMADHCQ9H3L0 296 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-225ENST00000523950 YY1AP1Q9H869 796 aa11.03□□□□□ -0.64
VEGFA-225ENST00000523950 SLC17A5Q9NRA2 495 aa11.03□□□□□ -0.64
VEGFA-225ENST00000523950 INIPQ9NRY2 104 aa11.03□□□□□ -0.64
VEGFA-225ENST00000523950 MED29Q9NX70 200 aa11.03□□□□□ -0.64
VEGFA-225ENST00000523950 SLC25A15Q9Y619 301 aa11.03□□□□□ -0.64
VEGFA-225ENST00000523950 SETXQ7Z333 2677 aaKnown RBP11.03□□□□□ -0.64
VEGFA-225ENST00000523950 CELSR2Q9HCU4 2923 aa11.02□□□□□ -0.64
VEGFA-225ENST00000523950 MCIDASD6RGH6 385 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 ACOT8O14734 319 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 CLOCKO15516 846 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 SIAH2O43255 324 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 ENTPD5O75356 428 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 SERPINI2O75830 405 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 DIRAS1O95057 198 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 WNT11O96014 354 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 IGHG1P01857 330 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 IGHMP01871 453 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 NR2C1P13056 603 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 MAKP20794 623 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 FUT4P22083 530 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 LOXP28300 417 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-225ENST00000523950 IFNGR2P38484 337 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 AQP2P41181 271 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 CSNK1A1P48729 337 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-225ENST00000523950 CHRNB3Q05901 458 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 FOXD4Q12950 439 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-225ENST00000523950 CAMK2DQ13557 499 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 GK3PQ14409 553 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 NCMAPQ5T1S8 102 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 FAM205BPQ63HN1 556 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 ANKRD16Q6P6B7 361 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 KLHL17Q6TDP4 642 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 SEZ6L2Q6UXD5 910 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 LINGO2Q7L985 606 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 CDH24Q86UP0 819 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 LINC00471Q8N535 108 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 OR4K5Q8NGD3 323 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 OR6N1Q8NGY5 312 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 TMEM54Q969K7 222 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 ZNF566Q969W8 418 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 PLPPR2Q96GM1 343 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 TXNDC15Q96J42 360 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 CLPTM1LQ96KA5 538 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 SEPHS2Q99611 448 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 FUZQ9BT04 418 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 ULBP2Q9BZM5 246 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 PLEKHF2Q9H8W4 249 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 CRLF2Q9HC73 371 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 GPR35Q9HC97 309 aa11.02□□□□□ -0.65
VEGFA-225ENST00000523950 ARPC4-TTLL3A0A0A6YYG9 625 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 TRBV4-1A0A0J9YWV2 114 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 SH3PXD2BA1X283 911 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 ZNF99A8MXY4 864 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-225ENST00000523950 M0R3G1 203 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 GSC2O15499 205 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 RAP2AP10114 183 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 RRM2P31350 389 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 OMPP47874 163 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 LIMS1P48059 325 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 HMGA2P52926 109 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.652e-28■■□□□ 11.6
VEGFA-225ENST00000523950 CEACAM16Q2WEN9 425 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 TBRG1Q3YBR2 411 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 C9orf135Q5VTT2 229 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 TBPL2Q6SJ96 375 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 TMEM108Q6UXF1 575 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 ZNF627Q7L945 461 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 CCDC36Q8IYA8 594 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 MOSPD2Q8NHP6 518 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 FNDC8Q8TC99 324 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 ASB10Q8WXI3 467 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 BCL2L2Q92843 193 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-225ENST00000523950 RADILQ96JH8 1075 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 TMEM204Q9BSN7 226 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 TXNIPQ9H3M7 391 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 GLTPQ9NZD2 209 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 TMCC3Q9ULS5 477 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 MGAT4BQ9UQ53 548 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 AURKCQ9UQB9 309 aa11.01□□□□□ -0.65
VEGFA-225ENST00000523950 RAI1Q7Z5J4 1906 aaPredicted RBP11□□□□□ -0.65
VEGFA-225ENST00000523950 F13BP05160 661 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 CD3EP07766 207 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 PGA4P0DJD7 388 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 PGA3P0DJD8 388 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 ACADSP16219 412 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 PTAFRP25105 342 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 GPR4P46093 362 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 CLRN1P58418 232 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 UBE2NP61088 152 aaKnown RBP11□□□□□ -0.65
VEGFA-225ENST00000523950 LGALS3BPQ08380 585 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 FLOT2Q14254 428 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 MELKQ14680 651 aa11□□□□□ -0.65
VEGFA-225ENST00000523950 LAPTM4AQ15012 233 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms