RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 MAPK12P53778 367 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 LMO4P61968 165 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF155Q12901 538 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-210ENST00000522843 SCGB2A2Q13296 93 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 MAPRE2Q15555 327 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 TMEM176BQ3YBM2 270 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-210ENST00000522843 C4orf46Q504U0 113 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 PDSS1Q5T2R2 415 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 FBXW9Q5XUX1 488 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 FAHD2BQ6P2I3 314 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-210ENST00000522843 HACD2Q6Y1H2 254 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 COMMD6Q7Z4G1 85 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 FUNDC1Q8IVP5 155 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 OR56A1Q8NGH5 318 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 OR52E4Q8NGH9 312 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 OR2T11Q8NH01 316 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 OR4C3Q8NH37 302 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 ASB10Q8WXI3 467 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 FAHD2AQ96GK7 314 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 KCNA7Q96RP8 456 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 SERPINI1Q99574 410 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 MRI1Q9BV20 369 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 SPATA5L1Q9BVQ7 753 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 TBL1XR1Q9BZK7 514 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 SHCBP1LQ9BZQ2 653 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 NARFLQ9H6Q4 476 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 FKRPQ9H9S5 495 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 EFCAB1Q9HAE3 211 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 SLC17A5Q9NRA2 495 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 CA10Q9NS85 328 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 AIG1Q9NVV5 245 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 TREM2Q9NZC2 230 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 UTS2RQ9UKP6 389 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 ICAM5Q9UMF0 924 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 GRIP1Q9Y3R0 1128 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 CAPN7Q9Y6W3 813 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 IGHV1-18A0A0C4DH31 117 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 CIB4A0PJX0 185 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 DNAJC9-AS1A6NH13 148 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 MARCH11A6NNE9 402 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF724A8MTY0 619 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 E9PBE3 544 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 CYTIPO60759 359 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 CRCPO75575 148 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 TUSC2O75896 110 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 SPDEFO95238 335 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 H6PDO95479 791 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 OXSR1O95747 527 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 OR4A8P0C604 315 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 RAP2AP10114 183 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 PRPS2P11908 318 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 PRTN3P24158 256 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 HMOX2P30519 316 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 RFX3P48380 749 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 ALDH9A1P49189 494 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 KRTAP10-3P60369 221 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 PHEXP78562 749 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 RASGEF1BQ0VAM2 473 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 SF3A3Q12874 501 aaKnown RBP eCLIP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 RIPK1Q13546 671 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 CYLC2Q14093 348 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 CD226Q15762 336 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 TOMM34Q15785 309 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 DNAL1Q4LDG9 190 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 ATP6AP1LQ52LC2 224 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 RFTN2Q52LD8 501 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 ELFN2Q5R3F8 820 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 C9orf135Q5VTT2 229 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 C8orf82Q6P1X6 216 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 UGT2A3Q6UWM9 527 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 ARHGAP24Q8N264 748 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 SLC43A2Q8N370 569 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 DPP10Q8N608 796 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 SIGLECL1Q8N7X8 197 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF527Q8NB42 609 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 AGR3Q8TD06 166 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 WDR60Q8WVS4 1066 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 EXOSC8Q96B26 276 aaKnown RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 TUBGCP3Q96CW5 907 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 SH3YL1Q96HL8 342 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 REXO5Q96IC2 774 aaKnown RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF48Q96MX3 618 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 DOK1Q99704 481 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 RAB1BQ9H0U4 201 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 MMP27Q9H306 513 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 FARSBQ9NSD9 589 aaKnown RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 DDX28Q9NUL7 540 aaKnown RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 NMRK1Q9NWW6 199 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 C1orf109Q9NX04 203 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 NDE1Q9NXR1 346 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 KLHL9Q9P2J3 617 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 VPS29Q9UBQ0 182 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 MALT1Q9UDY8 824 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 OPN4Q9UHM6 478 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 NDUFAF1Q9Y375 327 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 RRP15Q9Y3B9 282 aaKnown RBP5.67□□□□□ -1.5
SDCBP-210ENST00000522843 GMEB1Q9Y692 573 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF780BQ9Y6R6 833 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 DNAH1Q9P2D7 4330 aa5.67□□□□□ -1.5
SDCBP-210ENST00000522843 IGKV3D-15A0A087WSY6 115 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms