RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 C1orf198Q9H425 327 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 FGF22Q9HCT0 170 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 hCG_1807616A0A1W2PRN6 198 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 TSPAN11A1L157 253 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 SULT1B1O43704 296 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 NUDT21O43809 227 aaKnown RBP12.73□□□□□ -0.37
SYNPO-205ENST00000522122 PAPLNO95428 1278 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 HOXB5P09067 269 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 ELK1P19419 428 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 SLC35D3Q5M8T2 416 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 RTL6Q6ICC9 239 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF620Q6ZNG0 422 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 SLC16A9Q7RTY1 509 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF454Q8N9F8 522 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 LCORQ96JN0 433 aaPredicted RBP12.73□□□□□ -0.37
SYNPO-205ENST00000522122 Q96M85 177 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 ATF6BQ99941 703 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 PDCD1LG2Q9BQ51 273 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 LIN7BQ9HAP6 207 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 GLTPQ9NZD2 209 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 KLHL13Q9P2N7 655 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 LAMTOR5O43504 91 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 SEMG1P04279 462 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 POLR2HP52434 150 aaKnown RBP12.72□□□□□ -0.37
SYNPO-205ENST00000522122 SRYQ05066 204 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 HTR4Q13639 388 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 RAB11FIP2Q7L804 512 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 PCNPQ8WW12 178 aaKnown RBP12.72□□□□□ -0.37
SYNPO-205ENST00000522122 PFDN5Q99471 154 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 NUDT22Q9BRQ3 303 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 NCDNQ9UBB6 729 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 CD207Q9UJ71 328 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 C19orf53Q9UNZ5 99 aaPredicted RBP12.72□□□□□ -0.37
SYNPO-205ENST00000522122 TRAV36DV7A0A075B6V5 113 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 GLCEO94923 617 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 CD160O95971 181 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 SERPINE2P07093 398 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF28P17035 718 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 MEP1BQ16820 701 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 TMEM201Q5SNT2 666 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 KIAA0895LQ68EN5 471 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 MEX3BQ6ZN04 569 aaKnown RBP12.72□□□□□ -0.37
SYNPO-205ENST00000522122 TRAPPC6BQ86SZ2 158 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 CMIPQ8IY22 773 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 FRMD1Q8N878 549 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 OR51D1Q8NGF3 324 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 SLC35A4Q96G79 324 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 SLC46A1Q96NT5 459 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 BCL2L10Q9HD36 194 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 EMC3Q9P0I2 261 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 SULT1C2O00338 296 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 THBS1P07996 1170 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 CX3CR1P49238 355 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 EVX1P49640 407 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 UBE2NP61088 152 aaKnown RBP12.72□□□□□ -0.37
SYNPO-205ENST00000522122 STEAP1BQ6NZ63 245 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 MRPL21Q7Z2W9 205 aaKnown RBP12.72□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF679Q8IYX0 411 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 OR14K1Q8NGZ2 314 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 PFN4Q8NHR9 129 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 SGCZQ96LD1 299 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 LYRM4Q9HD34 91 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 EHFQ9NZC4 300 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 ASCC3Q8N3C0 2202 aaKnown RBP12.72□□□□□ -0.37
SYNPO-205ENST00000522122 TRBV11-1A0A0K0K1C0 115 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 ATG12O94817 140 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 UTS2O95399 124 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 KIR2DL3P43628 341 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 HTRA3P83110 453 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 MPEG1Q2M385 716 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 ABHD17BQ5VST6 288 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 TMPRSS11EQ9UL52 423 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 MYO16Q9Y6X6 1858 aa12.72□□□□□ -0.37
SYNPO-205ENST00000522122 SMCO3A2RU48 225 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 SSX4O60224 188 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 SERPINA2P20848 420 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 CNN3Q15417 329 aaKnown RBP12.71□□□□□ -0.37
SYNPO-205ENST00000522122 DNAAF1Q8NEP3 725 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 STK35Q8TDR2 534 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 SEC22AQ96IW7 307 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 SEMA6CQ9H3T2 930 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 TRIM64BA6NI03 449 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 KRBOX1C9JBD0 128 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 GZMKP49863 264 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 TAS2R20P59543 309 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 LILRB2Q8N423 598 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 TCEAL3Q969E4 200 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 RASD2Q96D21 266 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 VN1R3Q9BXE9 311 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 BIN3Q9NQY0 253 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 SLC22A23A1A5C7 686 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 BSGP35613 385 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 RCBTB1Q8NDN9 531 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 OR4K15Q8NH41 348 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 OR1E3Q8WZA6 343 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 ALG14Q96F25 216 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 RPS10P5Q9NQ39 176 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms