RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 KLC3Q6P597 504 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 ZNF662Q6ZS27 426 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 CMIPQ8IY22 773 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 CCDC36Q8IYA8 594 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 KDM8Q8N371 416 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 OR5D16Q8NGK9 328 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 FGFBP3Q8TAT2 258 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 CFHR4Q92496 578 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 SLC47A1Q96FL8 570 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 CHMP6Q96FZ7 201 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 KIRREL1Q96J84 757 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 ACTRT3Q9BYD9 372 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 TRIM31Q9BZY9 425 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 TOR3AQ9H497 397 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 ZCCHC3Q9NUD5 404 aaKnown RBP7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 DECR2Q9NUI1 292 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 FAM53CQ9NYF3 392 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 MKLN1Q9UL63 735 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 PCDHGB4Q9UN71 923 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 TANC2Q9HCD6 1990 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 HUWE1Q7Z6Z7 4374 aaKnown RBP7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 ZNF816-ZNF321PA0A0X1KG74 233 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 LCE6AA0A183 80 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 ZNF99A8MXY4 864 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 TM9SF1O15321 606 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 AKAP10O43572 662 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 TSPAN9O75954 239 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 RBP1P09455 135 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 PATE4P0C8F1 98 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 OR8G3PP0DMU2 310 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 CD79AP11912 226 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 TACR3P29371 465 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 GIPRP48546 466 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 PCBP3P57721 371 aaKnown RBP7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 KRTAP10-11P60412 298 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 RPS23P62266 143 aaKnown RBP7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 RAB39AQ14964 217 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 GSG1Q2KHT4 349 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 CASC10Q5T4H9 136 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 CLEC6AQ6EIG7 209 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 TMEM225Q6GV28 225 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 RGS7BPQ6MZT1 257 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 GPRIN3Q6ZVF9 776 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 EIF3MQ7L2H7 374 aaKnown RBP7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 HMGN2P46Q86SG4 172 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 LRRC28Q86X40 367 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 C1orf174Q8IYL3 243 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 C11orf44Q8N8P7 122 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 ZNF563Q8TA94 476 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 FAM76AQ8TAV0 307 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 SSMEM1Q8WWF3 244 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 NEURL3Q96EH8 262 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 ELMOD3Q96FG2 381 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 FAM71F1Q96KD3 344 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 OR7D2Q96RA2 312 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 DCLRE1CQ96SD1 692 aaKnown RBP7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 DIRC2Q96SL1 478 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 B9D2Q9BPU9 175 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 DENND2DQ9H6A0 471 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 FN3KRPQ9HA64 309 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 B3GAT1Q9P2W7 334 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 TMCO1Q9UM00 188 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 RCE1Q9Y256 329 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 PCDHGB5Q9Y5G0 923 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 NPTNQ9Y639 398 aa7.38□□□□□ -1.23
TRAPPC9-212ENST00000521944 IGHV2-70DA0A0C4DH43 119 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 SHISA3A0PJX4 238 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 TNFRSF13BO14836 293 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 SMIM24O75264 130 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 GPIP06744 558 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 CHRM4P08173 479 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 WNT2P09544 360 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 UROSP10746 265 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 CCL2P13500 99 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 HMOX2P30519 316 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 MAGEA12P43365 314 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 IER3P46695 156 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 PTDSS1P48651 473 aaKnown RBP7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 MMP15P51511 669 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 CLDN17P56750 224 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 KLF3P57682 345 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 GLO1Q04760 184 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 HERPUD1Q15011 391 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 ZMYND11Q15326 602 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 DEFB121Q5J5C9 76 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 ZNF678Q5SXM1 525 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 C6orf89Q6UWU4 347 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 ZNF627Q7L945 461 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 DDIASQ8IXT1 998 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 TMEM123Q8N131 208 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 LYG1Q8N1E2 194 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 ZFP28Q8NHY6 868 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 PSMA8Q8TAA3 256 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 SYNPRQ8TBG9 265 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 GEMIN6Q8WXD5 167 aaKnown RBP7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 CNOT9Q92600 299 aaKnown RBP7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 PMM1Q92871 262 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 PPCDCQ96CD2 204 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 DDIT4LQ96D03 193 aa7.37□□□□□ -1.23
TRAPPC9-212ENST00000521944 TMEM237Q96Q45 408 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms