RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PDIK1LQ8N165 341 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 GABRG1Q8N1C3 465 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 LIX1Q8N485 282 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 FBXL13Q8NEE6 735 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 OR1S2Q8NGQ3 325 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 RHEBL1Q8TAI7 183 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 NRGNQ92686 78 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 FRAT1Q92837 279 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 PLEKHF1Q96S99 279 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 NRIP2Q9BQI9 281 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 BPIFA3Q9BQP9 254 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 OR11A1Q9GZK7 315 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 SRMSQ9H3Y6 488 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 LYARQ9NX58 379 aaKnown RBP3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 XCL2Q9UBD3 114 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 CLCF1Q9UBD9 225 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 GNPTGQ9UJJ9 305 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 ERVV-1B6SEH8 477 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 SIRPB1O00241 398 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 NDUFAB1O14561 156 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 EEDO75530 441 aaKnown RBP3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 EIF3GO75821 320 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 LY6G6DO95868 133 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 STAG3L3P0CL85 134 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 EIF2S2P20042 333 aaKnown RBP3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 SLC1A1P43005 524 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 SUB1P53999 127 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 SPAG1Q07617 926 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 MAB21L1Q13394 359 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 MRPL23Q16540 153 aaKnown RBP3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 NRF1Q16656 503 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 C22orf42Q6IC83 251 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 FBXL22Q6P050 247 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 ASCL5Q7RTU5 278 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 IQCKQ8N0W5 287 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 PNKDQ8N490 385 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 C11orf42Q8N5U0 333 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 BPIFCQ8NFQ6 507 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 LINC01006Q8NI28 216 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 ARPC1AQ92747 370 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 IQCGQ9H095 443 aaKnown RBP3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 OR51M1Q9H341 326 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 TMEM165Q9HC07 324 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 MRPS30Q9NP92 439 aaKnown RBP3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 C20orf96Q9NUD7 363 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 LSM7Q9UK45 103 aaKnown RBP3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 SLC25A15Q9Y619 301 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 AKNAQ7Z591 1439 aa3.77□□□□□ -1.81
HMGB1P46-201ENST00000520062 IGLV3-10A0A075B6K4 115 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 TRBV9A0A0B4J1U6 114 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 A8MUA0 341 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 CDC7O00311 574 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 SLC31A2O15432 143 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 FGGP02679 453 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 ERCC1P07992 297 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 ANXA5P08758 320 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 CHTF8P0CG12 524 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 CCNB1P14635 433 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 STOMP27105 288 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 CD1BP29016 333 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 STX17P56962 302 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 KRTAP10-9P60411 292 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 YWHAGP61981 247 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 HSDL1Q3SXM5 330 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 LY6G6FQ5SQ64 297 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 OTPQ5XKR4 325 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 CTRB2Q6GPI1 263 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 REEP3Q6NUK4 255 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 ZNF544Q6NX49 715 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 TMEM53Q6P2H8 277 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 RNF165Q6ZSG1 346 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 TMCO2Q7Z6W1 182 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 KATNAL2Q8IYT4 538 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 EID2Q8N6I1 236 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 PQLC3Q8N755 202 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 OR10G9Q8NGN4 311 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 OR1N2Q8NGR9 330 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 CXorf40AQ8TE69 158 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 PEX13Q92968 403 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 C8orf44Q96CB5 159 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 GSDMAQ96QA5 445 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 SLC29A1Q99808 456 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 SH3GL3Q99963 347 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 RARRES2Q99969 163 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 HES7Q9BYE0 225 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 DNTTIP1Q9H147 329 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 CWH43Q9H720 699 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 FGF20Q9NP95 211 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 MTRF1LQ9UGC7 380 aaKnown RBP3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 KIF25-AS1Q9Y6Z4 181 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 INSRP06213 1382 aa3.76□□□□□ -1.81
HMGB1P46-201ENST00000520062 SPECC1L-ADORA2AF8WAN1 911 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 SUPT7LO94864 414 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 IGKV3-15P01624 115 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 ALDOBP05062 364 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 RALBP11234 206 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 HPGDP15428 266 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 KLK2P20151 261 aa3.75□□□□□ -1.81
HMGB1P46-201ENST00000520062 ZBTB25P24278 435 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms