RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 IFI30P13284 250 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 PTAFRP25105 342 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 CDKN1AP38936 164 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 PTH2RP49190 550 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 ST3GAL3Q11203 375 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 FHL1Q13642 323 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 IQCCQ4KMZ1 466 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 Q5PR19 223 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 ANKRD16Q6P6B7 361 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 LRFN4Q6PJG9 635 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 SLC22A25Q6T423 547 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 KLHL24Q6TFL4 600 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 TMEM108Q6UXF1 575 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 NANOGNBQ7Z5D8 188 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 ABHD12BQ7Z5M8 362 aaPredicted RBP11.6□□□□□ -0.55
VEGFA-219ENST00000518824 NRMQ8IXM6 262 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 DEFB107AQ8IZN7 70 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 OFCC1Q8IZS5 231 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 ANKS4BQ8N8V4 417 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 FGFBP3Q8TAT2 258 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 TMEM54Q969K7 222 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 C7orf34Q96L11 122 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 POLR2J2Q9GZM3 115 aaKnown RBP11.6□□□□□ -0.55
VEGFA-219ENST00000518824 POLR2J3Q9H1A7 115 aaKnown RBP11.6□□□□□ -0.55
VEGFA-219ENST00000518824 DLL4Q9NR61 685 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 DCAF13Q9NV06 445 aaKnown RBP11.6□□□□□ -0.55
VEGFA-219ENST00000518824 ZNF224Q9NZL3 707 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 MOKQ9UQ07 419 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 MED31Q9Y3C7 131 aa11.6□□□□□ -0.55
VEGFA-219ENST00000518824 ARPC4-TTLL3A0A0A6YYG9 625 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 OR6C65A6NJZ3 312 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 ZNF726A6NNF4 738 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 hCG_2039718K7EN88 272 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 OVOL3O00110 214 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 FAM107AO95990 144 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 HIST1H2ABP04908 130 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 CECR9P0C854 216 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 T-ENOLP0DO92 83 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 HSD17B1P14061 328 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 CD99P14209 185 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 CALCRP30988 508 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 CSNK1A1P48729 337 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 VLDLRP98155 873 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 MYBPC1Q00872 1141 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 FXNQ16595 210 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 KLHL17Q6TDP4 642 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 RINLQ6ZS11 566 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 HIST3H2AQ7L7L0 130 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 IGFN1Q86VF2 1251 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 CIARTQ8N365 385 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-219ENST00000518824 LRRC75AQ8NAA5 344 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 OR6N1Q8NGY5 312 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 OR6X1Q8NH79 312 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 MAGEE2Q8TD90 523 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-219ENST00000518824 TMEM171Q8WVE6 324 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 LIPHQ8WWY8 451 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 HIST1H2ACQ93077 130 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 GTPBP3Q969Y2 492 aaKnown RBP11.59□□□□□ -0.55
VEGFA-219ENST00000518824 LRR1Q96L50 414 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 HS6ST2Q96MM7 605 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 ZNF347Q96SE7 839 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 SMR3AQ99954 134 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 TRAF4Q9BUZ4 470 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-219ENST00000518824 FNDC11Q9BVV2 318 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 ULBP2Q9BZM5 246 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 GSX1Q9H4S2 264 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-219ENST00000518824 ZNF701Q9NV72 531 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-219ENST00000518824 NDUFAF4Q9P032 175 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 ENPP4Q9Y6X5 453 aa11.59□□□□□ -0.55
VEGFA-219ENST00000518824 TRAV27A0A087WT01 109 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 IGKV1D-43A0A0B4J1Z2 117 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 ZNF99A8MXY4 864 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-219ENST00000518824 NDUFAB1O14561 156 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 CDC42EP2O14613 210 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 ARPC2O15144 300 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 AKAP8O43823 692 aaKnown RBP11.58□□□□□ -0.56
VEGFA-219ENST00000518824 WNT11O96014 354 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 HLA-HP01893 362 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 SEMG1P04279 462 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 PATE4P0C8F1 98 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 PGA4P0DJD7 388 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 PGA3P0DJD8 388 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 B4GALT1P15291 398 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 ZNF26P17031 533 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-219ENST00000518824 GPR4P46093 362 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 UBE2NP61088 152 aaKnown RBP11.58□□□□□ -0.56
VEGFA-219ENST00000518824 PIGFQ07326 219 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 KRT72Q14CN4 511 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 TRAM2Q15035 370 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 YTHDF3Q7Z739 585 aaKnown RBP11.58□□□□□ -0.56
VEGFA-219ENST00000518824 MDP1Q86V88 176 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 LRRC75A-AS1Q8N1F1 130 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 CLDN22Q8N7P3 220 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 SYT14Q8NB59 555 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 OR13C2Q8NGS9 318 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 ASB10Q8WXI3 467 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 BPIFA2Q96DR5 249 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 RADILQ96JH8 1075 aa11.58□□□□□ -0.56
VEGFA-219ENST00000518824 ZNF75AQ96N20 296 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms