RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ASB9Q96DX5 294 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 HSFY1Q96LI6 401 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 SH3GL3Q99963 347 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 SLC17A9Q9BYT1 436 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 GCOM2Q9BZD3 368 aaPredicted RBP2.84□□□□□ -1.95
SQLE-202ENST00000518604 ROPN1BQ9BZX4 212 aaPredicted RBP2.84□□□□□ -1.95
SQLE-202ENST00000518604 ZFP14Q9HCL3 533 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 CTPS2Q9NRF8 586 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 PCYOX1Q9UHG3 505 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 PRO0461Q9UI25 63 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 IKZF2Q9UKS7 526 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 PACSIN2Q9UNF0 486 aaPredicted RBP2.84□□□□□ -1.95
SQLE-202ENST00000518604 HEBP2Q9Y5Z4 205 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 CARMIL3Q8ND23 1372 aa2.84□□□□□ -1.96
SQLE-202ENST00000518604 IGLV3-22A0A075B6J6 115 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 A0A1W2PPV9 198 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 FOXE1O00358 373 aaPredicted RBP2.83□□□□□ -1.96
SQLE-202ENST00000518604 CCL21O00585 134 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 DYNC1I1O14576 645 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 SOX15O60248 233 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 CSF3P09919 207 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 UBTFL1P0CB47 393 aaPredicted RBP2.83□□□□□ -1.96
SQLE-202ENST00000518604 IGHV3-43DP0DP04 118 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 MCF2P10911 925 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 SLC2A3P11169 496 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 HOXA9P31269 272 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 TFPI2P48307 235 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 MNAT1P51948 309 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 SUB1P53999 127 aaKnown RBP eCLIP2.83□□□□□ -1.96
SQLE-202ENST00000518604 CRISP3P54108 245 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 ATP5IP56385 69 aaPredicted RBP2.83□□□□□ -1.96
SQLE-202ENST00000518604 DDX39BQ13838 428 aaKnown RBP2.83□□□□□ -1.96
SQLE-202ENST00000518604 GK3PQ14409 553 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 PSG5Q15238 335 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 UQCC3Q6UW78 93 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 PSTKQ8IV42 348 aaKnown RBP2.83□□□□□ -1.96
SQLE-202ENST00000518604 NECAB1Q8N987 351 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 ZNF557Q8N988 423 aaPredicted RBP2.83□□□□□ -1.96
SQLE-202ENST00000518604 OR4F6Q8NGB9 312 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 AURKBQ96GD4 344 aaPredicted RBP2.83□□□□□ -1.96
SQLE-202ENST00000518604 PKIBQ9C010 78 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 ETNK2Q9NVF9 386 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 DEC1Q9P2X7 70 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 GNPTGQ9UJJ9 305 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 ASB3Q9Y575 518 aa2.83□□□□□ -1.96
SQLE-202ENST00000518604 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 IGLV11-55A0A075B6I3 123 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 BTBD17A6NE02 478 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 SNAI2O43623 268 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 SS18L1O75177 396 aaPredicted RBP2.82□□□□□ -1.96
SQLE-202ENST00000518604 PALMO75781 387 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 C1orf105O95561 183 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 TMEM50AO95807 157 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 PLEKP08567 350 aaPredicted RBP2.82□□□□□ -1.96
SQLE-202ENST00000518604 ZDHHC11BP0C7U3 371 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 NCF2P19878 526 aaPredicted RBP2.82□□□□□ -1.96
SQLE-202ENST00000518604 IFNA8P32881 189 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 RORAP35398 523 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 BST2Q10589 180 aaKnown RBP2.82□□□□□ -1.96
SQLE-202ENST00000518604 SMARCB1Q12824 385 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 PPIL2Q13356 520 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 EIF4EBP2Q13542 120 aaPredicted RBP2.82□□□□□ -1.96
SQLE-202ENST00000518604 SSX2Q16385 188 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 TMEM183BQ1AE95 376 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 LCN12Q6JVE5 192 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 CNIH2Q6PI25 160 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 THOC6Q86W42 341 aaKnown RBP2.82□□□□□ -1.96
SQLE-202ENST00000518604 TMEM183AQ8IXX5 376 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 SAXO1Q8IYX7 474 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 UBE2J2Q8N2K1 259 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 OR1L6Q8NGR2 347 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 OR2G2Q8NGZ5 317 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 CD300LFQ8TDQ1 290 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 TMEM158Q8WZ71 300 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 SHC3Q92529 594 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 HDHD3Q9BSH5 251 aaPredicted RBP2.82□□□□□ -1.96
SQLE-202ENST00000518604 OSBPL10Q9BXB5 764 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 LINC00597Q9H2U6 94 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 IFI27L2Q9H2X8 130 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 RBAKQ9NYW8 714 aaPredicted RBP2.82□□□□□ -1.96
SQLE-202ENST00000518604 MSH6P52701 1360 aa2.82□□□□□ -1.96
SQLE-202ENST00000518604 PHF3Q92576 2039 aaKnown RBP2.81□□□□□ -1.96
SQLE-202ENST00000518604 A0A0B4J2A0 478 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 KIR2DL5BA0A0G2JN68 375 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 KIR2DL5BA0A0G2JPC4 375 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 PRSS37A4D1T9 235 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 ERVV-1B6SEH8 477 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 TMX2-CTNND1H3BSU7 103 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 DLGAP1O14490 977 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 PSTPIP1O43586 416 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 SUPT3HO75486 399 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 BGLAPP02818 100 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 GAPDHP04406 335 aaKnown RBP2.81□□□□□ -1.96
SQLE-202ENST00000518604 KITLGP21583 273 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 OMGP23515 440 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 ATP5C1P36542 298 aaKnown RBP2.81□□□□□ -1.96
SQLE-202ENST00000518604 PPOXP50336 477 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 CCR6P51684 374 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 CCR8P51685 355 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 FGF8P55075 233 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms