RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TRAM2Q15035 370 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 CEACAM16Q2WEN9 425 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 ANKDD1AQ495B1 522 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 HIKESHIQ53FT3 197 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 GLYATQ6IB77 296 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 DTX2Q86UW9 622 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 CYP4Z1Q86W10 505 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 RNF113BQ8IZP6 322 aaKnown RBP11.17□□□□□ -0.62
CLCN3-210ENST00000515420 LRRC17Q8N6Y2 441 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 PFN4Q8NHR9 129 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 SMAP2Q8WU79 429 aaPredicted RBP11.17□□□□□ -0.62
CLCN3-210ENST00000515420 SLC25A44Q96H78 314 aaPredicted RBP11.17□□□□□ -0.62
CLCN3-210ENST00000515420 TXNDC15Q96J42 360 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 EMC6Q9BV81 110 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 MAN2C1Q9NTJ4 1040 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 C20orf141Q9NUB4 165 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 ZNF701Q9NV72 531 aaPredicted RBP11.17□□□□□ -0.62
CLCN3-210ENST00000515420 ARL8BQ9NVJ2 186 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 FAM53CQ9NYF3 392 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 CISD1Q9NZ45 108 aaKnown RBP11.17□□□□□ -0.62
CLCN3-210ENST00000515420 STX18Q9P2W9 335 aaKnown RBP11.17□□□□□ -0.62
CLCN3-210ENST00000515420 TEP1Q99973 2627 aaKnown RBP11.16□□□□□ -0.62
CLCN3-210ENST00000515420 A0A1W2PRG6 482 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 M0R3G1 203 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 OVOL3O00110 214 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 FFAR1O14842 300 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 PRSS23O95084 383 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 IGKV3-15P01624 115 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 IGLV1-44P01699 117 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 FOSL1P15407 271 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 NCK1P16333 377 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 CSNK1A1P48729 337 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 BIDP55957 195 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 ARF1P84077 181 aaKnown RBP11.16□□□□□ -0.62
CLCN3-210ENST00000515420 RPL18Q07020 188 aaKnown RBP11.16□□□□□ -0.62
CLCN3-210ENST00000515420 TAF11Q15544 211 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 PGGHGQ32M88 737 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 ZNF544Q6NX49 715 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 SLC22A25Q6T423 547 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 KRTAP1-3Q8IUG1 177 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 CCDC197Q8NCU1 140 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 OR6N1Q8NGY5 312 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 ACOT11Q8WXI4 607 aaPredicted RBP11.16□□□□□ -0.62
CLCN3-210ENST00000515420 TMEM54Q969K7 222 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 BPIFA2Q96DR5 249 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 SLC38A2Q96QD8 506 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 KATNB1Q9BVA0 655 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 ULBP2Q9BZM5 246 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 DENND2DQ9H6A0 471 aaPredicted RBP11.16□□□□□ -0.62
CLCN3-210ENST00000515420 CD300AQ9UGN4 299 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 EGFL7Q9UHF1 273 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 LAMP3Q9UQV4 416 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 SNX13Q9Y5W8 968 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 ENPP4Q9Y6X5 453 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 USF3Q68DE3 2245 aa11.16□□□□□ -0.62
CLCN3-210ENST00000515420 A0A1W2PRQ8 180 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 BLOC1S5-TXNDC5H3BN57 136 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 SERPINI2O75830 405 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 BCL10O95999 233 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 IGHG1P01857 330 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 SOD3P08294 240 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 PGA4P0DJD7 388 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 PGA3P0DJD8 388 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 NR2C1P13056 603 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 CD99P14209 185 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 RHCEP18577 417 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 SLC9A3P48764 834 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 PTH2RP49190 550 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 DAP3P51398 398 aaKnown RBP11.15□□□□□ -0.62
CLCN3-210ENST00000515420 PRKCDQ05655 676 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 CAMK2DQ13557 499 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 DGCR6Q14129 220 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 Q5PR19 223 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 PHYHD1Q5SRE7 291 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 AGAP6Q5VW22 663 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 CARD17Q5XLA6 110 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 ARHGAP24Q8N264 748 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 FITM2Q8N6M3 262 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 FAM156AQ8NDB6 213 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 NEUROG1Q92886 237 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 ZNF566Q969W8 418 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 ZNF837Q96EG3 531 aaPredicted RBP11.15□□□□□ -0.62
CLCN3-210ENST00000515420 CDRT15Q96T59 188 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 SEPHS2Q99611 448 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 FOXB1Q99853 325 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 DHRS9Q9BPW9 319 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 TRAF4Q9BUZ4 470 aaPredicted RBP11.15□□□□□ -0.62
CLCN3-210ENST00000515420 INIPQ9NRY2 104 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 GLTPQ9NZD2 209 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 POU2F3Q9UKI9 436 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 HIF3AQ9Y2N7 669 aa11.15□□□□□ -0.62
CLCN3-210ENST00000515420 FLNAP21333 2647 aaKnown RBP11.14□□□□□ -0.63
CLCN3-210ENST00000515420 A0A096LPE4 126 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 IGHV1-18A0A0C4DH31 117 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 A0A1W2PPZ6 126 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 J3KTA2 159 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 MGRN1O60291 552 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 PIP5K1CO60331 668 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 CRYAAP02489 173 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms